STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Deposited chemical component · ZN

Chemical component ZN

ZINC ION

complete deposited InChIKey

Identity record

Chemical identity

Exact identity
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Status
complete deposited InChIKey
CCD aliases
ZN
Formula
Zn

Identity → Preparation → Assay

Measured preparations and candidate identities

0 linked preparations
No measured preparation is linked to this exact identity in the curated subset.

Experimental structures

Deposited occurrences

46 entries
EntryClassificationPWWP domain coordinatesTitle
11NZComplexesObservedCryo-EM structure of human DNMT3A R882H decamer
11OAComplexesObservedCryo-EM structure of human DNMT3A R882H octadecamer
11OHComplexesObservedCryo-EM structure of human DNMT3A homo-tetramer
11OIComplexesObservedCryo-EM structure of human DNMT3A homo-hexamer
3PFSAPOObservedPWWP Domain of Human Bromodomain and PHD finger-containing protein 3
4COSAPOObservedCrystal structure of the PHD-Bromo-PWWP cassette of human PRKCBP1
4N4GAPOObservedCrystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha
4N4HComplexesObservedCrystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha in complex with histone H3.1K36me3
4N4IComplexesObservedCrystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha in complex with histone H3.3K36me3
4NS5APOObservedCrystal structure of human BS69 Bromo-Zinc finger-PWWP
5B73APOObservedCrystal structure of human ZMYND8 PHD-Bromo-PWWP domain
5Y1ZComplexesObservedCrystal structure of ZMYND8 PHD-BROMO-PWWP tandem in complex with Drebrin ADF-H domain
7CROUnclassified_ReviewNot observedNSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP
7CRPUnclassified_ReviewNot observedNSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (1:1 binding mode)
7CRQUnclassified_ReviewNot observedNSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
7CRRUnclassified_ReviewNot observedNative NSD3 bound to 187-bp nucleosome
7OUFUnclassified_ReviewNot observedStructure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
7OUGUnclassified_ReviewNot observedSTLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
7OUHUnclassified_ReviewNot observedStructure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
7PELUnclassified_ReviewNot observedCryoEM structure of simian T-cell lymphotropic virus intasome in complex with PP2A regulatory subunit B56 gamma
8EIHComplexesObservedCryo-EM structure of human DNMT3B homo-tetramer (form I)
8EIIUnclassified_ReviewNot observedCryo-EM structure of human DNMT3B homo-tetramer (form II)
8EIJUnclassified_ReviewNot observedCryo-EM structure of human DNMT3B homo-trimer
8EIKUnclassified_ReviewNot observedCryo-EM structure of human DNMT3B homo-hexamer
9E00Unclassified_ReviewNot observedCryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
9E05ComplexesObservedThe consensus model of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
9E0FComplexesObservedA focus of DNMT tetramer (1) of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
9E0GComplexesObservedA focus of tetramer (2) of the cryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to di-nucleosome
9E2DComplexesObservedCryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to a di-nucleosome with a five base pair linker
9E2QUnclassified_ReviewNot observedCryo-EM structure of DNMT 3A2/3B3 tetramer in complex with a di-nucleosome with a six base pair linker
9E2RComplexesObservedCryo-EM structure of human DNMT3A2-DNMT3B3 complex bound to a di-nucleosome and an histone-3 peptide
9E3DComplexesObservedCryo-EM structure of DNMT 3A2/3B3 tetramer in complex with a di-nucleosome with K120R mutant H2B
9E3RUnclassified_ReviewNot observedCryo-EM structure of PWWP domain deleted DNMT 3A2/3B3 in complex with a di-nucleosome
9E3UUnclassified_ReviewNot observedCryo-EM structure of DNMT 3A2/3B3 tetramer bound to a di-nucleosome with a 25 base-pair linker
9LQ1Unclassified_ReviewNot observedStructure of human DNMT3A-TCL1A complex
9MP0Unclassified_ReviewNot observedThe cryo-EM structure of the human DNA methyltransferases DNMT3A2 and DNMT3L dodecamer
9MPOUnclassified_ReviewNot observedThe cryo-EM structure of the human DNA methyltransferase DNMT3A2 and DNMT3L octamer
9MPPUnclassified_ReviewNot observedThe cryo-EM structure of nucleosome-bound DNA methyltransferases DNMT3A2 and DNMT3L
9PRWComplexesObservedCryo-EM structure of human DNMT3A/3L
9Q7UComplexesObservedComposite map for Cryo-EM structure of DNMT3A2-DNMT3B3 tetramer bound to 167H3K36me2-nucleosome
9S28Unclassified_ReviewNot observedMVV STC intasome in complex with LEDGF
9S29Unclassified_ReviewNot observedMVV CSC intasome in complex with LEDGF
9T2FAPOObservedCrystal structure of human PRKCBP1 Zinc finger MYND-type containing 8 with pentaglutamate tag
9T2GAPOObservedHuman PRKCBP1 zinc finger MYND-type containing 8 with crystallization epitope mutations N221R:M226H
9Y4PComplexesObservedCryo-EM structure of DNMT3A2/3B3 in complex with H3K36me2 di-nucleosome with eight base pair linker
9Y61ComplexesObservedCryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader