STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Versioned source-reviewed overlay · Phase 6B

Experimental Bioactivity

Primary-source observations, original endpoints, explicit target/construct scope and documented gaps. Phase 5 and Phase 6A remain frozen.

All compound classifications
13additional observed outcomes
12new source preparations
2NSD2 PWWP1 competition observations
150independently triaged source candidates (not validated binders)
Assay, construct, verification, source and structural status

All filter predicates must match one observation. Only an exact quantitative endpoint may be filtered by concentration. Units are normalized for filtering without altering the source result.

9 matching observations · 9 preparations

Phase 6B additions only; Phase 6A's baseline 80 remain separately accessible.

PreparationTarget and scopeMethod and original endpointSource and verificationStructure / limitations
SYC2parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.07 ± 0.01 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher compound table row 28; SPR Kd (µM) column, corroborated by abstractaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

reported PWWP affinity, but PWWP1 vs PWWP2 attribution remains unverified

Published SMILES and SPR column verified; original construct, statistic definition, replicate count and tested lot/salt remain unresolved. Not assignable to NSD3 PWWP1/PWWP2.

Specific experimental conditions not fully extracted

SYB7parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd >20 µMcensored lower bound, no fitted uncertainty · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 20; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Source reports Kd >20 µM; do NOT interpret as exact Kd, positive binder or categorical inactivity

Censored lower bound only; no numeric exact Kd or biological inactivity conclusion.

Original article table lacks complete assay condition and tested construct details

SYB10parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.11 ± 0.07 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 23; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYB11parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.15 ± 0.03 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 24; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYC1parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.13 ± 0.04 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 27; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYC3parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.32 ± 0.11 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 29; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYC5parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.18 ± 0.03 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 31; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYC6parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =0.25 ± 0.06 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 32; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

SYC7parent graph verified assayed material unresolvedNSD3 — PWWP instance unresolvedConstruct not verifiedSPR (publisher compound table header)
Kd =7.69 ± 0.32 µMpublished ± statistic not independently confirmed · Replicate information not extracted
10.1021/acs.jmedchem.6c00983Publisher source compound table row 33; SPR Kd (µM) columnaccepted with bounded interpretationNo verified PWWP-bound experimental binary structure
Interpretation and limitations

Reported SPR PWWP-domain binding; PWWP1/PWWP2 instance and exact construct not independently established

Binding method supported by publisher table header; experimental sequence/variant, statistic and salt/lot remain uncertain. No experimentally deposited PWWP-bound complex verified.

Original article table lacks complete assay condition and tested construct details

Download complete Phase 6B accepted-observation CSV · Full original source-decision ledger