Phase 6B · provenance and decision ledger
Source-verification findings
Source review outcomes are not automatically accepted assays or biological negatives. Original identifiers and frozen evidence remain intact.
38 / 38 records
CSV download (selected status)| Record ID | Source / evidence | Review outcome | Original data & limitations |
|---|---|---|---|
| CCD_UNRESOLVED:UNL | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "CCD_UNRESOLVED:UNL",
"original_issue": "unresolved_or_component_context",
"original_name": "Unknown ligand",
"original_site_ids": [
"PDB:3PMI:LIG:H:UNL:20:.:SITE:UP:Q2TAK8:PWWP1:C",
"PDB:3PMI:LIG:I:UNL:21:.:SITE:UP:Q2TAK8:PWWP1:D"
],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/3PMI"
],
"status": "insufficient_evidence"
} |
| CCD_UNRESOLVED:UNX | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "CCD_UNRESOLVED:UNX",
"original_issue": "unresolved_or_component_context",
"original_name": "UNKNOWN ATOM OR ION",
"original_site_ids": [
"PDB:4FU6:LIG:F:UNX:205:.:SITE:UP:O75475:PWWP1:A",
"PDB:4RXJ:LIG:D:UNX:1103:.:SITE:UP:Q9BZ95:PWWP2:A",
"PDB:5C6S:LIG:S:UNX:1318:.:SITE:UP:P55201:PWWP1:A",
"PDB:1KHC:LIG:F:UNX:167:.:SITE:UP:O88509:PWWP1:A",
"PDB:1KHC:LIG:G:UNX:168:.:SITE:UP:O88509:PWWP1:A",
"PDB:6UE6:LIG:N:UNX:2006:.:SITE:UP:O96028:PWWP1:A",
"PDB:3QBY:LIG:O:UNX:104:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:3QJ6:LIG:D:UNX:95:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:4RXJ:LIG:F:UNX:1105:.:SITE:UP:Q9BZ95:PWWP2:A",
"PDB:5VC8:LIG:OA:UNX:415:.:SITE:UP:O96028:PWWP1:B",
"PDB:5VC8:LIG:IA:UNX:409:.:SITE:UP:O96028:PWWP1:B",
"PDB:5VC8:LIG:LA:UNX:412:.:SITE:UP:O96028:PWWP1:B",
"PDB:5VC8:LIG:RA:UNX:418:.:SITE:UP:O96028:PWWP1:B",
"PDB:5VC8:LIG:EA:UNX:405:.:SITE:UP:O96028:PWWP1:B",
"PDB:5VC8:LIG:BA:UNX:402:.:SITE:UP:O96028:PWWP1:B",
"PDB:3QBY:LIG:U:UNX:97:.:SITE:UP:Q7Z4V5:PWWP1:B",
"PDB:4RXJ:LIG:G:UNX:1106:.:SITE:UP:Q9BZ95:PWWP2:A",
"PDB:4Z02:LIG:G:UNX:1105:.:SITE:UP:O95696:PWWP1:A",
"PDB:4Z02:LIG:K:UNX:1109:.:SITE:UP:O95696:PWWP1:A",
"PDB:4RXJ:LIG:E:UNX:1104:.:SITE:UP:Q9BZ95:PWWP2:A",
"PDB:5C6S:LIG:L:UNX:1311:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:H:UNX:1307:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:M:UNX:1312:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:E:UNX:1304:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:F:UNX:1305:.:SITE:UP:P55201:PWWP1:A",
"PDB:3QBY:LIG:Q:UNX:106:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:5C6S:LIG:N:UNX:1313:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:O:UNX:1314:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:K:UNX:1310:.:SITE:UP:P55201:PWWP1:A",
"PDB:6OQM:LIG:H:UNX:207:.:SITE:UP:P52701:PWWP1:A",
"PDB:3L42:LIG:D:UNX:3:.:SITE:UP:P55201:PWWP1:A",
"PDB:3L42:LIG:C:UNX:2:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:R:UNX:1317:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:P:UNX:1315:.:SITE:UP:P55201:PWWP1:A",
"PDB:3L42:LIG:B:UNX:1:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:G:UNX:1306:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:Q:UNX:1316:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:J:UNX:1309:.:SITE:UP:P55201:PWWP1:A",
"PDB:5C6S:LIG:I:UNX:1308:.:SITE:UP:P55201:PWWP1:A",
"PDB:6OQM:LIG:I:UNX:208:.:SITE:UP:P52701:PWWP1:A",
"PDB:3QBY:LIG:N:UNX:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:3QBY:LIG:K:UNX:100:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:6OQM:LIG:B:UNX:201:.:SITE:UP:P52701:PWWP1:A",
"PDB:3QBY:LIG:H:UNX:97:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:4FU6:LIG:I:UNX:208:.:SITE:UP:O75475:PWWP1:A",
"PDB:3QBY:LIG:M:UNX:102:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:5VC8:LIG:R:UNX:412:.:SITE:UP:O96028:PWWP1:A",
"PDB:6UE6:LIG:O:UNX:2007:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:Z:UNX:420:.:SITE:UP:O96028:PWWP1:A",
"PDB:6UE6:LIG:R:UNX:2010:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:S:UNX:413:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:T:UNX:414:.:SITE:UP:O96028:PWWP1:A",
"PDB:6UE6:LIG:L:UNX:2004:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:N:UNX:408:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:P:UNX:410:.:SITE:UP:O96028:PWWP1:A",
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"PDB:5VC8:LIG:H:UNX:402:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:GA:UNX:407:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:X:UNX:418:.:SITE:UP:O96028:PWWP1:A",
"PDB:1KHC:LIG:M:UNX:174:.:SITE:UP:O88509:PWWP1:A",
"PDB:6UE6:LIG:T:UNX:2002:.:SITE:UP:O96028:PWWP1:A",
"PDB:1KHC:LIG:K:UNX:172:.:SITE:UP:O88509:PWWP1:A",
"PDB:1KHC:LIG:L:UNX:173:.:SITE:UP:O88509:PWWP1:A",
"PDB:5VC8:LIG:U:UNX:415:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:G:UNX:401:.:SITE:UP:O96028:PWWP1:A",
"PDB:5VC8:LIG:W:UNX:417:.:SITE:UP:O96028:PWWP1:A",
"PDB:6UE6:LIG:J:UNX:2002:.:SITE:UP:O96028:PWWP1:A",
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"PDB:5VC8:LIG:Q:UNX:411:.:SITE:UP:O96028:PWWP1:A",
"PDB:1KHC:LIG:E:UNX:166:.:SITE:UP:O88509:PWWP1:A",
"PDB:1KHC:LIG:D:UNX:165:.:SITE:UP:O88509:PWWP1:A",
"PDB:1KHC:LIG:B:UNX:163:.:SITE:UP:O88509:PWWP1:A",
"PDB:1KHC:LIG:C:UNX:164:.:SITE:UP:O88509:PWWP1:A",
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"PDB:1KHC:LIG:S:UNX:180:.:SITE:UP:O88509:PWWP1:A",
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"PDB:4RXJ:LIG:C:UNX:1102:.:SITE:UP:Q9BZ95:PWWP2:A",
"PDB:4RXJ:LIG:H:UNX:1107:.:SITE:UP:Q9BZ95:PWWP2:A",
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"PDB:6UE6:LIG:IA:UNX:2005:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:GA:UNX:2003:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:LA:UNX:2002:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:Y:UNX:2007:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:HA:UNX:2004:.:SITE:UP:O96028:PWWP1:C",
"PDB:6XCG:LIG:L:UNX:404:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:MA:UNX:2003:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:FA:UNX:2002:.:SITE:UP:O96028:PWWP1:C",
"PDB:6XCG:LIG:H:UNX:404:.:SITE:UP:O96028:PWWP1:C",
"PDB:6XCG:LIG:K:UNX:403:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:AA:UNX:2009:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:X:UNX:2006:.:SITE:UP:O96028:PWWP1:C",
"PDB:6UE6:LIG:NA:UNX:2004:.:SITE:UP:O96028:PWWP1:D",
"PDB:7LMT:LIG:O:UNX:402:.:SITE:UP:O96028:PWWP1:D",
"PDB:7MDN:LIG:O:UNX:402:.:SITE:UP:O96028:PWWP1:D",
"PDB:6UE6:LIG:MA:UNX:2003:.:SITE:UP:O96028:PWWP1:D",
"PDB:6UE6:LIG:FA:UNX:2002:.:SITE:UP:O96028:PWWP1:D",
"PDB:6UE6:LIG:IA:UNX:2005:.:SITE:UP:O96028:PWWP1:D",
"PDB:6UE6:LIG:LA:UNX:2002:.:SITE:UP:O96028:PWWP1:D",
"PDB:6UE6:LIG:PA:UNX:2002:.:SITE:UP:O96028:PWWP1:E",
"PDB:6UE6:LIG:QA:UNX:2003:.:SITE:UP:O96028:PWWP1:E",
"PDB:7LMT:LIG:O:UNX:402:.:SITE:UP:O96028:PWWP1:E",
"PDB:7MDN:LIG:O:UNX:402:.:SITE:UP:O96028:PWWP1:E",
"PDB:6UE6:LIG:RA:UNX:2004:.:SITE:UP:O96028:PWWP1:E",
"PDB:6UE6:LIG:TA:UNX:2006:.:SITE:UP:O96028:PWWP1:E",
"PDB:6UE6:LIG:SA:UNX:2005:.:SITE:UP:O96028:PWWP1:E",
"PDB:6UE6:LIG:VA:UNX:2002:.:SITE:UP:O96028:PWWP1:F",
"PDB:7MDN:LIG:J:UNX:402:.:SITE:UP:O96028:PWWP1:F",
"PDB:7LMT:LIG:J:UNX:402:.:SITE:UP:O96028:PWWP1:F",
"PDB:6UE6:LIG:WA:UNX:2003:.:SITE:UP:O96028:PWWP1:F",
"PDB:6UE6:LIG:TA:UNX:2006:.:SITE:UP:O96028:PWWP1:F",
"PDB:6UE6:LIG:XA:UNX:2004:.:SITE:UP:O96028:PWWP1:F",
"PDB:6UE6:LIG:YA:UNX:2005:.:SITE:UP:O96028:PWWP1:F",
"PDB:6UE6:LIG:KB:UNX:2012:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:JB:UNX:2011:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:DB:UNX:2005:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:EB:UNX:2006:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:FB:UNX:2007:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:IB:UNX:2010:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:BB:UNX:2003:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:HB:UNX:2009:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:GB:UNX:2008:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:AB:UNX:2002:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:CB:UNX:2004:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:XA:UNX:2004:.:SITE:UP:O96028:PWWP1:G",
"PDB:6UE6:LIG:MB:UNX:2002:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:OB:UNX:2004:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:NB:UNX:2003:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:GB:UNX:2008:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:RA:UNX:2004:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:JB:UNX:2011:.:SITE:UP:O96028:PWWP1:H",
"PDB:6UE6:LIG:AB:UNX:2002:.:SITE:UP:O96028:PWWP1:H"
],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/1KHC",
"https://www.rcsb.org/structure/3L42",
"https://www.rcsb.org/structure/3QBY",
"https://www.rcsb.org/structure/3QJ6",
"https://www.rcsb.org/structure/4FU6",
"https://www.rcsb.org/structure/4LD6",
"https://www.rcsb.org/structure/4RXJ",
"https://www.rcsb.org/structure/4Z02",
"https://www.rcsb.org/structure/5C6S",
"https://www.rcsb.org/structure/5VC8",
"https://www.rcsb.org/structure/6OQM",
"https://www.rcsb.org/structure/6UE6",
"https://www.rcsb.org/structure/6XCG",
"https://www.rcsb.org/structure/7LMT",
"https://www.rcsb.org/structure/7MDN"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:AIMZAKOWTDKKHP-HNECRKQMSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:AIMZAKOWTDKKHP-HNECRKQMSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "4-[[cyclopropyl-[(~{Z})-2-methyl-4-(5-oxidanylidene-2~{H}-1,4-oxazin-3-yl)but-3-enoyl]amino]methyl]-~{N}-[3-[2-[[4-(hydroxymethyl)phenyl]carbonyl-methyl-amino]ethyl]phenyl]benzamide",
"original_site_ids": [
"PDB:29HI:LIG:F:A1J21:501:.:SITE:UP:O96028:PWWP2:B",
"PDB:29HI:LIG:F:A1J21:501:.:SITE:UP:O96028:PWWP1:B"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/29HI"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:DBSDZVMWEMKFCH-QMMMGPOBSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:DBSDZVMWEMKFCH-QMMMGPOBSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "2-[(2S)-2-methylpiperidin-1-yl]ethan-1-amine",
"original_site_ids": [
"PDB:7HH3:LIG:J:A1A3X:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HH3:LIG:J:A1A3X:103:.:SITE:UP:Q7Z4V5:PWWP1:B"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HH3"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:HFHPBMVMXFZJNO-MRVPVSSYSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:HFHPBMVMXFZJNO-MRVPVSSYSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "(2R)-1-(cyclohexylamino)propan-2-ol",
"original_site_ids": [
"PDB:7HHD:LIG:J:A1A3V:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HHD:LIG:J:A1A3V:103:.:SITE:UP:Q7Z4V5:PWWP1:B"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HHD"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:KKBVPDRSYCAPEU-UHFFFAOYSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:KKBVPDRSYCAPEU-UHFFFAOYSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "(2S)-N-(5-ethyl-1,3,4-thiadiazol-2-yl)oxolane-2-carboxamide",
"original_site_ids": [
"PDB:7HGH:LIG:J:A1A4A:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HGH:LIG:J:A1A4A:103:.:SITE:UP:Q7Z4V5:PWWP1:B"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HGH"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:LOFCJGPTBIGJGR-SECBINFHSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:LOFCJGPTBIGJGR-SECBINFHSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "(1R)-N-methyl-1-(pyridin-4-yl)propan-1-amine",
"original_site_ids": [
"PDB:7HH9:LIG:J:A1A3W:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HH9:LIG:J:A1A3W:103:.:SITE:UP:Q7Z4V5:PWWP1:B",
"PDB:7HH9:LIG:L:A1A3W:102:.:SITE:UP:Q7Z4V5:PWWP1:C"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HH9"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:LZXLHLSTUPFULX-UHFFFAOYSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:LZXLHLSTUPFULX-UHFFFAOYSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "[(3S)-1-(propan-2-yl)piperidin-3-yl]methanol",
"original_site_ids": [
"PDB:7HGV:LIG:G:A1A33:104:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HGV:LIG:K:A1A33:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HGV:LIG:K:A1A33:103:.:SITE:UP:Q7Z4V5:PWWP1:B",
"PDB:7HGV:LIG:M:A1A33:102:.:SITE:UP:Q7Z4V5:PWWP1:C"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HGV"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O",
"original_issue": "unresolved_or_component_context",
"original_name": "N-TRIMETHYLLYSINE",
"original_site_ids": [
"PDB:3MO8:LIG:B:M3L:7:7:SITE:UP:P55201:PWWP1:A",
"PDB:2X4Y:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A",
"PDB:2X4W:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A",
"PDB:2X4X:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A",
"PDB:3QJ6:LIG:B:M3L:79:7:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:6IIS:LIG:E:M3L:36:4:SITE:UP:Q9Y3E1:PWWP1:A",
"PDB:5CIU:LIG:D:M3L:36:9:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:4N4I:LIG:B:M3L:36:18:SITE:UP:Q8R5C8:PWWP1:A",
"PDB:4N4H:LIG:B:M3L:36:16:SITE:UP:Q8R5C8:PWWP1:A",
"PDB:3QBY:LIG:D:M3L:20:6:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:3QBY:LIG:D:M3L:20:6:SITE:UP:Q7Z4V5:PWWP1:B",
"PDB:6IIS:LIG:F:M3L:36:4:SITE:UP:Q9Y3E1:PWWP1:B",
"PDB:5CIU:LIG:C:M3L:36:9:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:2X4Y:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C",
"PDB:2X4X:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C",
"PDB:2X4X:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E",
"PDB:2X4Y:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E",
"PDB:2X4Y:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G",
"PDB:2X4X:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G",
"PDB:2X4Y:LIG:J:M3L:36:15:SITE:UP:P55201:PWWP1:I",
"PDB:2X4Y:LIG:L:M3L:36:15:SITE:UP:P55201:PWWP1:K",
"PDB:2X4Y:LIG:N:M3L:36:15:SITE:UP:P55201:PWWP1:M",
"PDB:2X4Y:LIG:P:M3L:36:15:SITE:UP:P55201:PWWP1:O"
],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/2X4W",
"https://www.rcsb.org/structure/2X4X",
"https://www.rcsb.org/structure/2X4Y",
"https://www.rcsb.org/structure/3MO8",
"https://www.rcsb.org/structure/3QBY",
"https://www.rcsb.org/structure/3QJ6",
"https://www.rcsb.org/structure/4N4H",
"https://www.rcsb.org/structure/4N4I",
"https://www.rcsb.org/structure/5CIU",
"https://www.rcsb.org/structure/6IIS"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:PTFCDOFLOPIGGS-UHFFFAOYSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:PTFCDOFLOPIGGS-UHFFFAOYSA-N",
"original_issue": "unresolved_or_component_context",
"original_name": "ZINC ION",
"original_site_ids": [
"PDB:4COS:LIG:D:ZN:1402:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2F:LIG:D:ZN:503:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2G:LIG:D:ZN:503:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:5B73:LIG:C:ZN:502:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:5B73:LIG:D:ZN:503:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:8EIH:LIG:G:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIJ:LIG:E:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EII:LIG:F:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIK:LIG:H:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EII:LIG:G:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIH:LIG:H:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIK:LIG:I:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIJ:LIG:F:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIJ:LIG:G:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIK:LIG:J:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EIH:LIG:I:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:8EII:LIG:H:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:A",
"PDB:9PRW:LIG:F:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OA:LIG:S:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OI:LIG:P:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:E",
"PDB:9MPO:LIG:G:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:9LQ1:LIG:I:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OA:LIG:T:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:9PRW:LIG:G:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OI:LIG:Q:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:E",
"PDB:9MPO:LIG:H:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:9LQ1:LIG:H:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OA:LIG:U:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:9PRW:LIG:H:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:11OI:LIG:R:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:E",
"PDB:9MPO:LIG:I:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:9LQ1:LIG:G:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:A",
"PDB:4COS:LIG:C:ZN:1401:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2G:LIG:C:ZN:502:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2F:LIG:C:ZN:502:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:8EII:LIG:J:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIH:LIG:K:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIJ:LIG:I:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIK:LIG:L:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIJ:LIG:J:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EII:LIG:K:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIH:LIG:L:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIK:LIG:M:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIK:LIG:N:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIH:LIG:M:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EII:LIG:L:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:8EIJ:LIG:K:ZN:904:.:SITE:UP:Q9UBC3:PWWP1:B",
"PDB:11NZ:LIG:M:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OA:LIG:W:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OH:LIG:N:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:D",
"PDB:11OI:LIG:T:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:F",
"PDB:11NZ:LIG:N:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OA:LIG:X:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OH:LIG:O:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:D",
"PDB:11OI:LIG:U:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:F",
"PDB:11NZ:LIG:O:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OA:LIG:Y:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:B",
"PDB:11OH:LIG:P:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:D",
"PDB:11OI:LIG:V:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:F",
"PDB:5Y1Z:LIG:H:ZN:503:.:SITE:UP:Q9ULU4:PWWP1:C",
"PDB:5Y1Z:LIG:M:ZN:502:.:SITE:UP:Q9ULU4:PWWP1:C",
"PDB:8EIH:LIG:N:ZN:901:.:SITE:UP:Q9UBC3:PWWP1:C",
"PDB:8EII:LIG:M:ZN:901:.:SITE:UP:Q9UBC3:PWWP1:C",
"PDB:8EIK:LIG:P:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:D",
"PDB:8EII:LIG:N:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:C",
"PDB:8EIH:LIG:O:ZN:902:.:SITE:UP:Q9UBC3:PWWP1:C",
"PDB:8EIK:LIG:Q:ZN:903:.:SITE:UP:Q9UBC3:PWWP1:D",
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"PDB:9E05:LIG:OA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:Y",
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"PDB:9E0F:LIG:L:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:D",
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"PDB:9E05:LIG:HA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E00:LIG:EA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E0F:LIG:M:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:D",
"PDB:9E3U:LIG:X:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:O",
"PDB:9E2D:LIG:IA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:T",
"PDB:9E3R:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E2R:LIG:IA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E3D:LIG:EA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E2Q:LIG:IA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E05:LIG:IA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E00:LIG:FA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E0F:LIG:N:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:D",
"PDB:9E3U:LIG:Y:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:O",
"PDB:9E2D:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:T",
"PDB:9E3R:LIG:KA:ZN:1004:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E3D:LIG:FA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E2R:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E2Q:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E05:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9E00:LIG:GA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9Y4P:LIG:DA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:U",
"PDB:9Y4P:LIG:EA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:U",
"PDB:9Y4P:LIG:FA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:U",
"PDB:9Y4P:LIG:AA:ZN:1001:.:SITE:UP:Q9UBC3:PWWP1:S",
"PDB:9Y4P:LIG:BA:ZN:1002:.:SITE:UP:Q9UBC3:PWWP1:S",
"PDB:9Y4P:LIG:CA:ZN:1003:.:SITE:UP:Q9UBC3:PWWP1:S",
"PDB:9Y4P:LIG:HA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9Y4P:LIG:IA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9Y4P:LIG:JA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:V",
"PDB:9Y4P:LIG:SA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:Z",
"PDB:9Y4P:LIG:TA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:Z",
"PDB:9Y4P:LIG:UA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:Z",
"PDB:9Y4P:LIG:LA:ZN:1001:.:SITE:UP:Q9UBC3:PWWP1:W",
"PDB:9Y4P:LIG:MA:ZN:1002:.:SITE:UP:Q9UBC3:PWWP1:W",
"PDB:9Y4P:LIG:NA:ZN:1003:.:SITE:UP:Q9UBC3:PWWP1:W",
"PDB:9Y4P:LIG:OA:ZN:1001:.:SITE:UP:Q9Y6K1:PWWP1:Y",
"PDB:9Y4P:LIG:PA:ZN:1002:.:SITE:UP:Q9Y6K1:PWWP1:Y",
"PDB:9Y4P:LIG:QA:ZN:1003:.:SITE:UP:Q9Y6K1:PWWP1:Y",
"PDB:3PFS:LIG:C:ZN:1200:.:SITE:UP:Q9ULD4:PWWP1:A",
"PDB:4COS:LIG:B:ZN:1400:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2F:LIG:E:ZN:504:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:9T2G:LIG:B:ZN:501:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:4NS5:LIG:B:ZN:401:.:SITE:UP:Q15326:PWWP1:A",
"PDB:4N4H:LIG:C:ZN:401:.:SITE:UP:Q8R5C8:PWWP1:A",
"PDB:4N4G:LIG:B:ZN:401:.:SITE:UP:Q8R5C8:PWWP1:A",
"PDB:4N4I:LIG:C:ZN:401:.:SITE:UP:Q8R5C8:PWWP1:A",
"PDB:5B73:LIG:B:ZN:501:.:SITE:UP:Q9ULU4:PWWP1:A",
"PDB:3PFS:LIG:E:ZN:1200:.:SITE:UP:Q9ULD4:PWWP1:B",
"PDB:5Y1Z:LIG:G:ZN:502:.:SITE:UP:Q9ULU4:PWWP1:C",
"PDB:5Y1Z:LIG:N:ZN:503:.:SITE:UP:Q9ULU4:PWWP1:D"
],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/11NZ",
"https://www.rcsb.org/structure/11OA",
"https://www.rcsb.org/structure/11OH",
"https://www.rcsb.org/structure/11OI",
"https://www.rcsb.org/structure/3PFS",
"https://www.rcsb.org/structure/4COS",
"https://www.rcsb.org/structure/4N4G",
"https://www.rcsb.org/structure/4N4H",
"https://www.rcsb.org/structure/4N4I",
"https://www.rcsb.org/structure/4NS5",
"https://www.rcsb.org/structure/5B73",
"https://www.rcsb.org/structure/5Y1Z",
"https://www.rcsb.org/structure/7CRO",
"https://www.rcsb.org/structure/7CRP",
"https://www.rcsb.org/structure/7CRQ",
"https://www.rcsb.org/structure/7CRR",
"https://www.rcsb.org/structure/8EIH",
"https://www.rcsb.org/structure/8EII",
"https://www.rcsb.org/structure/8EIJ",
"https://www.rcsb.org/structure/8EIK",
"https://www.rcsb.org/structure/9E00",
"https://www.rcsb.org/structure/9E05",
"https://www.rcsb.org/structure/9E0F",
"https://www.rcsb.org/structure/9E0G",
"https://www.rcsb.org/structure/9E2D",
"https://www.rcsb.org/structure/9E2Q",
"https://www.rcsb.org/structure/9E2R",
"https://www.rcsb.org/structure/9E3D",
"https://www.rcsb.org/structure/9E3R",
"https://www.rcsb.org/structure/9E3U",
"https://www.rcsb.org/structure/9LQ1",
"https://www.rcsb.org/structure/9MP0",
"https://www.rcsb.org/structure/9MPO",
"https://www.rcsb.org/structure/9MPP",
"https://www.rcsb.org/structure/9PRW",
"https://www.rcsb.org/structure/9Q7U",
"https://www.rcsb.org/structure/9T2F",
"https://www.rcsb.org/structure/9T2G",
"https://www.rcsb.org/structure/9Y4P"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:QLSDWIHANVSIEK-SECBINFHSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:QLSDWIHANVSIEK-SECBINFHSA-N",
"original_issue": "deposited_research_ligand",
"original_name": "(3R)-N-methyl-1-(pyridazin-3-yl)piperidin-3-amine",
"original_site_ids": [
"PDB:7HH4:LIG:G:A1A39:104:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HH4:LIG:K:W0J:103:.:SITE:UP:Q7Z4V5:PWWP1:A",
"PDB:7HH4:LIG:K:W0J:103:.:SITE:UP:Q7Z4V5:PWWP1:B",
"PDB:7HH4:LIG:M:W0J:102:.:SITE:UP:Q7Z4V5:PWWP1:C"
],
"priority_tier": 2,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/7HH4"
],
"status": "insufficient_evidence"
} |
| INCHIKEY:WOAOENGFAAUUGT-UHFFFAOYSA-N | profile | partially resolved prior_Phase5_primary_source_review_reused | Existing source reports multiple assay contexts; no measured endpoints averaged or overwritten. Per-source preparation and role qualification retained. Full source/provenance record{
"action": "Existing source reports multiple assay contexts; no measured endpoints averaged or overwritten.",
"original_assay_ids": [
"PWWP5:ASSAY:0001",
"PWWP:ASSAY:0008",
"PWWP:ASSAY:0009"
],
"original_id": "INCHIKEY:WOAOENGFAAUUGT-UHFFFAOYSA-N",
"original_issue": "studied_source_observations",
"original_name": "BI-9321",
"original_site_ids": [
"PDB:6G2O:LIG:B:EJE:401:.:SITE:UP:Q9BZ95:PWWP1:A"
],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Per-source preparation and role qualification retained.",
"source_access": "prior_Phase5_primary_source_review_reused",
"source_location": "Xu et al. 2022, ITC table; existing Phase5 curator notes",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC8882712/",
"https://www.rcsb.org/structure/6G2O",
"https://www.thesgc.org/chemical-probes/bi-9321"
],
"status": "partially_resolved"
} |
| INCHIKEY:XVOYSCVBGLVSOL-REOHCLBHSA-N | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [],
"original_id": "INCHIKEY:XVOYSCVBGLVSOL-REOHCLBHSA-N",
"original_issue": "unresolved_or_component_context",
"original_name": "CYSTEINESULFONIC ACID",
"original_site_ids": [
"PDB:3LYI:LIG:C:OCS:1500:.:SITE:UP:O95696:PWWP1:A"
],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.rcsb.org/structure/3LYI"
],
"status": "insufficient_evidence"
} |
| PREP:COLLIE2025_11 | profile | partially resolved primary_article_schemes_and_Table_1 | Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved. Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved. Full source/provenance record{
"action": "Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved.",
"original_assay_ids": [
"PWWP:ASSAY:0025",
"PWWP:ASSAY:0018",
"PWWP11:ASSAY:0005"
],
"original_id": "PREP:COLLIE2025_11",
"original_issue": "studied_source_observations",
"original_name": "compound 11 (Collie 2025)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved.",
"source_access": "primary_article_schemes_and_Table_1",
"source_location": "Collie et al. 2025 Scheme 1/2, Table 1, Results",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "partially_resolved"
} |
| PREP:COLLIE2025_12 | profile | partially resolved primary_article_schemes_and_Table_1 | Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved. Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved. Full source/provenance record{
"action": "Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved.",
"original_assay_ids": [
"PWWP:ASSAY:0026",
"PWWP:ASSAY:0019",
"PWWP11:ASSAY:0006",
"PWWP:ASSAY:0030"
],
"original_id": "PREP:COLLIE2025_12",
"original_issue": "studied_source_observations",
"original_name": "compound 12 (Collie 2025)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved.",
"source_access": "primary_article_schemes_and_Table_1",
"source_location": "Collie et al. 2025 Scheme 1/2, Table 1, Results",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "partially_resolved"
} |
| PREP:COLLIE2025_13 | profile | partially resolved primary_article_schemes_and_Table_1 | Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved. Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved. Full source/provenance record{
"action": "Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved.",
"original_assay_ids": [
"PWWP:ASSAY:0027",
"PWWP:ASSAY:0020",
"PWWP11:ASSAY:0007",
"PWWP:ASSAY:0031"
],
"original_id": "PREP:COLLIE2025_13",
"original_issue": "studied_source_observations",
"original_name": "compound 13 (Collie 2025)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved.",
"source_access": "primary_article_schemes_and_Table_1",
"source_location": "Collie et al. 2025 Scheme 1/2, Table 1, Results",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "partially_resolved"
} |
| PREP:COLLIE2025_5 | profile | partially resolved primary_article_schemes_and_Table_1 | Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved. Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved. Full source/provenance record{
"action": "Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved.",
"original_assay_ids": [
"PWWP:ASSAY:0022",
"PWWP:ASSAY:0015",
"PWWP11:ASSAY:0002"
],
"original_id": "PREP:COLLIE2025_5",
"original_issue": "studied_source_observations",
"original_name": "compound 5 (Collie 2025)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved.",
"source_access": "primary_article_schemes_and_Table_1",
"source_location": "Collie et al. 2025 Scheme 1/2, Table 1, Results",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "partially_resolved"
} |
| PREP:COLLIE2025_6 | profile | partially resolved primary_article_schemes_and_Table_1 | Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved. Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved. Full source/provenance record{
"action": "Original preparation-level result and counter-screen confirmed; individual stereochemical/salt/preparation assignments not independently resolved.",
"original_assay_ids": [
"PWWP:ASSAY:0023",
"PWWP:ASSAY:0016",
"PWWP11:ASSAY:0003",
"PWWP:ASSAY:0028"
],
"original_id": "PREP:COLLIE2025_6",
"original_issue": "studied_source_observations",
"original_name": "compound 6 (Collie 2025)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Do not distribute preparation Kd to crystallographic candidate stereoisomers; exact chemistry and test batch unresolved.",
"source_access": "primary_article_schemes_and_Table_1",
"source_location": "Collie et al. 2025 Scheme 1/2, Table 1, Results",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "partially_resolved"
} |
| PREP:DEFREITAS2021_1 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0033",
"PWWP5:ASSAY:0034"
],
"original_id": "PREP:DEFREITAS2021_1",
"original_issue": "studied_source_observations",
"original_name": "compound 1 (de Freitas 2021)",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC8130708/"
],
"status": "insufficient_evidence"
} |
| PREP:H4K20me3_11mer | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP11:ASSAY:0010",
"PWWP:ASSAY:0036"
],
"original_id": "PREP:H4K20me3_11mer",
"original_issue": "unresolved_or_component_context",
"original_name": "H4K20me3 peptide / trimethyllysine monomer",
"original_site_ids": [],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC3119473/"
],
"status": "insufficient_evidence"
} |
| PREP:HS13 | profile | partially resolved publisher_abstract_and_preview | Published Kd/IC50 available in separate deferred source leads; existing qualitative Phase5 record not overwritten. Primary assay construct, full method and chemical identity incomplete; 968 vs 943 library-size discrepancy unresolved. Full source/provenance record{
"action": "Published Kd/IC50 available in separate deferred source leads; existing qualitative Phase5 record not overwritten.",
"original_assay_ids": [
"PWWP:ASSAY:0035"
],
"original_id": "PREP:HS13",
"original_issue": "unresolved_or_component_context",
"original_name": "HS13",
"original_site_ids": [],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Primary assay construct, full method and chemical identity incomplete; 968 vs 943 library-size discrepancy unresolved.",
"source_access": "publisher_abstract_and_preview",
"source_location": "Liu et al. BMC 2026 abstract and preview",
"source_urls": [
"https://doi.org/10.1016/j.bmc.2026.118751"
],
"status": "partially_resolved"
} |
| PREP:MS9715N | profile | partially resolved prior_Phase5_primary_source_review_reused | Existing direct binding and negative degradation-control evidence remain simultaneously valid. Original material identity and each distinct assay context remain as curated. Full source/provenance record{
"action": "Existing direct binding and negative degradation-control evidence remain simultaneously valid.",
"original_assay_ids": [
"PWWP5:ASSAY:0003",
"PWWP5:ASSAY:0006"
],
"original_id": "PREP:MS9715N",
"original_issue": "studied_source_observations",
"original_name": "MS9715N",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Original material identity and each distinct assay context remain as curated.",
"source_access": "prior_Phase5_primary_source_review_reused",
"source_location": "Xu et al. 2022, binding ITC and cellular immunoblot",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC8882712/"
],
"status": "partially_resolved"
} |
| PREP:NbH10 | profile | partially resolved primary_article | Protein nanobody binding and full-protein AlphaScreen separated; not a small-molecule preparation. Not an exact small-molecule chemical identity or substrate-specific PWWP binding proof in cells. Full source/provenance record{
"action": "Protein nanobody binding and full-protein AlphaScreen separated; not a small-molecule preparation.",
"original_assay_ids": [
"PWWP11:ASSAY:0008",
"PWWP11:ASSAY:0009",
"PWWP:ASSAY:0032"
],
"original_id": "PREP:NbH10",
"original_issue": "unresolved_or_component_context",
"original_name": "NbH10",
"original_site_ids": [],
"priority_tier": 3,
"record_type": "profile",
"remaining_uncertainty": "Not an exact small-molecule chemical identity or substrate-specific PWWP binding proof in cells.",
"source_access": "primary_article",
"source_location": "Vantieghem et al. 2026 Table 1; Figure 3",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC13204740/"
],
"status": "partially_resolved"
} |
| PREP:UNC7753 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0012",
"PWWP5:ASSAY:0013"
],
"original_id": "PREP:UNC7753",
"original_issue": "studied_source_observations",
"original_name": "UNC7753",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC10116495/"
],
"status": "insufficient_evidence"
} |
| PREP:UNC8269 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0016",
"PWWP5:ASSAY:0017",
"PWWP5:ASSAY:0015"
],
"original_id": "PREP:UNC8269",
"original_issue": "studied_source_observations",
"original_name": "UNC8269",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.nature.com/articles/s41589-024-01660-y"
],
"status": "insufficient_evidence"
} |
| PREP:UNC8325 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0019",
"PWWP5:ASSAY:0020",
"PWWP5:ASSAY:0018"
],
"original_id": "PREP:UNC8325",
"original_issue": "studied_source_observations",
"original_name": "UNC8325",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.nature.com/articles/s41589-024-01660-y"
],
"status": "insufficient_evidence"
} |
| PREP:UNC8587 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0014"
],
"original_id": "PREP:UNC8587",
"original_issue": "studied_source_observations",
"original_name": "UNC8587",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC10116495/"
],
"status": "insufficient_evidence"
} |
| PREP:UNC8884 | profile | insufficient evidence not_reexamined_at_primary_source_level | Original record, original classification and unresolved flag preserved Full record-specific primary-source context still requires review Full source/provenance record{
"action": "Original record, original classification and unresolved flag preserved",
"original_assay_ids": [
"PWWP5:ASSAY:0024"
],
"original_id": "PREP:UNC8884",
"original_issue": "studied_source_observations",
"original_name": "UNC8884",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "profile",
"remaining_uncertainty": "Full record-specific primary-source context still requires review",
"source_access": "not_reexamined_at_primary_source_level",
"source_location": null,
"source_urls": [
"https://www.nature.com/articles/s41589-024-01660-y"
],
"status": "insufficient_evidence"
} |
| PWWP11:ASSAY:0001 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "\u003e30 \u00b5M SPR Kd",
"original_assay_ids": [
"PWWP11:ASSAY:0001"
],
"original_id": "PWWP11:ASSAY:0001",
"original_issue": "reported_experimental_endpoint",
"original_name": "INCHIKEY:KOZGEDUWAQFVAV-UHFFFAOYSA-N",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0002 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "\u003e30 \u00b5M SPR Kd",
"original_assay_ids": [
"PWWP11:ASSAY:0002"
],
"original_id": "PWWP11:ASSAY:0002",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:COLLIE2025_5",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0003 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "\u003e30 \u00b5M SPR Kd",
"original_assay_ids": [
"PWWP11:ASSAY:0003"
],
"original_id": "PWWP11:ASSAY:0003",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:COLLIE2025_6",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0004 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "\u003e30 \u00b5M SPR Kd",
"original_assay_ids": [
"PWWP11:ASSAY:0004"
],
"original_id": "PWWP11:ASSAY:0004",
"original_issue": "reported_experimental_endpoint",
"original_name": "INCHIKEY:HHACEXLLNHJLFT-INIZCTEOSA-N",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0005 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "No binding (qualitative SPR; no numeric Kd)",
"original_assay_ids": [
"PWWP11:ASSAY:0005"
],
"original_id": "PWWP11:ASSAY:0005",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:COLLIE2025_11",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0006 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "No binding (qualitative SPR; no numeric Kd)",
"original_assay_ids": [
"PWWP11:ASSAY:0006"
],
"original_id": "PWWP11:ASSAY:0006",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:COLLIE2025_12",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0007 | observation | resolved and verified primary_article_published_Table_1_and_results | Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row. Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered. Full source/provenance record{
"action": "Confirmed original qualitative / censored counter-screen exactly; source-scope review flag resolved in Phase6B audit only. No new assay row.",
"observed_source_outcome": "No binding (qualitative SPR; no numeric Kd)",
"original_assay_ids": [
"PWWP11:ASSAY:0007"
],
"original_id": "PWWP11:ASSAY:0007",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:COLLIE2025_13",
"original_site_ids": [],
"priority_tier": 1,
"record_type": "observation",
"remaining_uncertainty": "Original specific source 6A preparation/fit details and modeled 9FOC stereoisomer mapping remain unaltered.",
"source_access": "primary_article_published_Table_1_and_results",
"source_location": "Collie et al. 2025, Table 1 NSD3 (263\u2013398) column; SPR footnote; Results paragraph",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC12434523/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0008 | observation | resolved and verified primary_full_article_Table_1_and_methods | Verified original apparent SPR Kd; biological nanobody, not a small molecule. No new accepted assay. Assay context must not transfer nanobody geometry or unrelated protein-level AlphaScreen to domain-specific affinity. Full source/provenance record{
"action": "Verified original apparent SPR Kd; biological nanobody, not a small molecule. No new accepted assay.",
"observed_source_outcome": "LEDGF/p75 PWWP 94.4 \u00b1 9.1 nM",
"original_assay_ids": [
"PWWP11:ASSAY:0008"
],
"original_id": "PWWP11:ASSAY:0008",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:NbH10",
"original_site_ids": [],
"priority_tier": 2,
"record_type": "observation",
"remaining_uncertainty": "Assay context must not transfer nanobody geometry or unrelated protein-level AlphaScreen to domain-specific affinity.",
"source_access": "primary_full_article_Table_1_and_methods",
"source_location": "Vantieghem et al. Biomolecules 2026 Table 1, NbH10 column; SPR methods",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC13204740/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0009 | observation | resolved and verified primary_full_article_Table_1_and_methods | Verified original apparent SPR Kd; biological nanobody, not a small molecule. No new accepted assay. Assay context must not transfer nanobody geometry or unrelated protein-level AlphaScreen to domain-specific affinity. Full source/provenance record{
"action": "Verified original apparent SPR Kd; biological nanobody, not a small molecule. No new accepted assay.",
"observed_source_outcome": "HRP-2 (HDGFL2) PWWP 81.2 \u00b1 1.8 nM",
"original_assay_ids": [
"PWWP11:ASSAY:0009"
],
"original_id": "PWWP11:ASSAY:0009",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:NbH10",
"original_site_ids": [],
"priority_tier": 2,
"record_type": "observation",
"remaining_uncertainty": "Assay context must not transfer nanobody geometry or unrelated protein-level AlphaScreen to domain-specific affinity.",
"source_access": "primary_full_article_Table_1_and_methods",
"source_location": "Vantieghem et al. Biomolecules 2026 Table 1, NbH10 column; SPR methods",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC13204740/"
],
"status": "resolved_and_verified"
} |
| PWWP11:ASSAY:0010 | observation | resolved and verified primary_article_Table_1_and_footnote | Verified source qualitative observation; original numeric null retained and no artificial censored Kd. No meaningful exact numerical affinity is supplied by source. Full source/provenance record{
"action": "Verified source qualitative observation; original numeric null retained and no artificial censored Kd.",
"observed_source_outcome": "Very weak; too weak for reliable Kd fit",
"original_assay_ids": [
"PWWP11:ASSAY:0010"
],
"original_id": "PWWP11:ASSAY:0010",
"original_issue": "reported_experimental_endpoint",
"original_name": "PREP:H4K20me3_11mer",
"original_site_ids": [],
"priority_tier": 2,
"record_type": "observation",
"remaining_uncertainty": "No meaningful exact numerical affinity is supplied by source.",
"source_access": "primary_article_Table_1_and_footnote",
"source_location": "Wu et al. PLOS ONE 2011 Table 1 H4K20me3 row and Very weak footnote",
"source_urls": [
"https://pmc.ncbi.nlm.nih.gov/articles/PMC3119473/"
],
"status": "resolved_and_verified"
} |