STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Published assay observation

compound 12 (Collie 2025) and NSD2

PWWP:ASSAY:0030

biochemical interaction inhibition

Reported observation

HTRF displacement IC50

= 2.49 µM ± 0.06

Reported uncertainty: SEM

Target domain
UP:O96028:PWWP1
Assay construct
208–368
Identity scope
paper label exact identity unresolved

Evidence provenance

Primary source

PMID:40959233

Table 1

Verification scope
Phase 3 primary Table 1 and actual Collie supporting PDF pages 7, 9 and 14; Carlino supporting PDF contents inspected, but the inherited main-article HTRF method remains not inspected after documented access attempts.
Assay and verification JSON

Field-level provenance

Assay conditions and source verification

Missing information is not proof of absence. The v1.2 source overlay separates not reported in inspected material, not inspected, not transcribed and not applicable.

FieldValue and source stateSource and interpretation
construct bounds{"end": 368, "numbering": "canonical UniProt inclusive", "start": 208}
verified
SV05B · Table S2, PDF page 7
Inspected source scope

Actual primary PDF obtained from official Europe PMC supplementary archive after direct ACS retrieval returned 403; Table S2, SPR, biochemical method and compound 11-13 chemistry visually checked

tagsN-terminal Avi; C-terminal 6His; biotinylated
verified
SV05B · Table S2, PDF page 7
Inspected source scope

Actual primary PDF obtained from official Europe PMC supplementary archive after direct ACS retrieval returned 403; Table S2, SPR, biochemical method and compound 11-13 chemistry visually checked

engineered mutationsnot reportedSV05B · Table S2, PDF page 7

No substitutions are listed for these assay constructs. The separate crystallography construct for 9FOE lists seven mutations; those are not applied to assay records. This is not a sequence audit.

Inspected source scope

Actual primary PDF obtained from official Europe PMC supplementary archive after direct ACS retrieval returned 403; Table S2, SPR, biochemical method and compound 11-13 chemistry visually checked

assay typeHTRF displacement IC50
verified
SV05A · Table 1
Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

temperature Cnot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

buffernot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

pHnot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

DMSO percentnot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

unitsµM
verified
SV05A · Table 1
Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

measurement uncertainty0.06
verified
SV05A · Table 1

Reported plus/minus magnitude, in the units of the assay result.

Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

uncertainty typeSEM
verified
SV05A · Table 1 footnote b
Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

replicate definition{"definition": "replicates; independence/biological level not specified for HTRF in Table 1", "n": 2}
verified
SV05A · Table 1 footnote b
Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

measurement entityPREP:COLLIE2025_12
verified
SV05A · Table 1

The reported result belongs to this experimental preparation and construct; structural CCD membership alone cannot transfer affinity.

Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

concentration rangenot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

incubation and flownot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

fittingnot inspectedSV05C · Cited full protocol, Carlino et al 2024; Collie SI PDF page 9

Collie SI gives a short HTRF description and cites Carlino 2024. The main article returned HTTP 403 and is absent from PMC/Europe PMC. The actual Carlino supplement was retrieved and inventoried (SV05D), but no HTRF protocol was found there. The cited main protocol remains not inspected; SPR conditions are not transferred.

Inspected source scope

Bibliography, abstract and supporting-information description inspected. Final official repository checks found no PMC or Europe PMC full text. Direct ACS article retrieval returned HTTP 403; the full HTRF protocol remains uninspected. The actual supporting PDF was separately retrieved and inventoried as SV05D.

negative observationnot applicableSV05A · Table 1
Inspected source scope

Actual primary XML; full Results, Table 1 and footnotes inspected

identity assignment{"absolute_sulfolane_configuration": null, "exact_ccd_id": null, "isomer_label": 1, "level": "source-labelled separated fraction", "reported_diastereomeric_ratio": "98.84:1.16", "retention_time_min": 7.1}
verified
SV05B · Compounds 12/13, PDF page 14

Purified fractions are not assumed enantiopure. Retention time is not an absolute stereochemical assignment.

Inspected source scope

Actual primary PDF obtained from official Europe PMC supplementary archive after direct ACS retrieval returned 403; Table S2, SPR, biochemical method and compound 11-13 chemistry visually checked

Structure → Component → Assay

Exact identity contact links

0 contact links
No exact-identity structural contact is linked to this observation. The preparation-level observation remains available.