STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Original experimental coordinate assessment

11OA · DNMT3A PWWP1

Label protein chain N · author chain(s) N · canonical annotation core 292–350

assessed from original mmcifrequires structural reviewELECTRON MICROSCOPY
Original deposited structureProtein/domain evidenceOriginal-coordinate 3D viewerDownload record as JSON
59 / 59Core Cα observations
59Residues with coordinates
198Missing heavy side-chain atoms in observed residues
0Verified local PWWP research-ligand instances

Independent actual-atom audit

Core residue completeness

All residue records CSV

The annotation core is shown only at positions supported by the original protein/entity-to-UniProt mapping. Unobserved residues are separate from observed residues whose side chains lack deposited atoms. Partial occupancies and alternate conformations are recorded independently.

CanonicalAuthor residueComponentSource presenceObserved heavy atomsMissing backbone atomsMissing side-chain atomsAlternate/occupancy warnings
292N:292ILEObserved5CD1, CG1, CG2
293N:293GLYObserved4None
294N:294GLUObserved5CD, CG, OE1, OE2
295N:295LEUObserved5CD1, CD2, CG
296N:296VALObserved5CG1, CG2
297N:297TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
298N:298GLYObserved4None
299N:299LYSObserved5CD, CE, CG, NZ
300N:300LEUObserved5CD1, CD2, CG
301N:301ARGObserved5CD, CG, CZ, NE, NH1, NH2
302N:302GLYObserved4None
303N:303PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
304N:304SERObserved5OG
305N:305TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
306N:306TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
307N:307PROObserved5CD, CG
308N:308GLYObserved4None
309N:309ARGObserved5CD, CG, CZ, NE, NH1, NH2
310N:310ILEObserved5CD1, CG1, CG2
311N:311VALObserved5CG1, CG2
312N:312SERObserved5OG
313N:313TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
314N:314TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
315N:315METObserved5CE, CG, SD
316N:316THRObserved5CG2, OG1
317N:317GLYObserved4None
318N:318ARGObserved5CD, CG, CZ, NE, NH1, NH2
319N:319SERObserved5OG
320N:320ARGObserved5CD, CG, CZ, NE, NH1, NH2
321N:321ALAObserved5None
322N:322ALAObserved5None
323N:323GLUObserved5CD, CG, OE1, OE2
324N:324GLYObserved4None
325N:325THRObserved5CG2, OG1
326N:326ARGObserved5CD, CG, CZ, NE, NH1, NH2
327N:327TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
328N:328VALObserved5CG1, CG2
329N:329METObserved5CE, CG, SD
330N:330TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
331N:331PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
332N:332GLYObserved4None
333N:333ASPObserved5CG, OD1, OD2
334N:334GLYObserved4None
335N:335LYSObserved5CD, CE, CG, NZ
336N:336PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
337N:337SERObserved5OG
338N:338VALObserved5CG1, CG2
339N:339VALObserved5CG1, CG2
340N:340CYSObserved5SG
341N:341VALObserved5CG1, CG2
342N:342GLUObserved5CD, CG, OE1, OE2
343N:343LYSObserved5CD, CE, CG, NZ
344N:344LEUObserved5CD1, CD2, CG
345N:345METObserved5CE, CG, SD
346N:346PROObserved5CD, CG
347N:347LEUObserved5CD1, CD2, CG
348N:348SERObserved5OG
349N:349SERObserved5OG
350N:350PHEObserved5CD1, CD2, CE1, CE2, CG, CZ

Exact deposited instances

Experimentally defined PWWP ligand environments

No actual PWWP research-ligand environment was established by the available Phase 6C coordinates. This does not imply that the domain is inactive or that no ligands have been reported elsewhere.

Source and interpretation

PDB source: 11OA; domain: UP:Q9Y6K1:PWWP1.

Original coordinate SHA-256: 22b69191b56482b52a2cc8a8a6f517b143b90300e647239a8ef53c45b3c5873c. The program never creates modeled missing atoms, rescores affinities, or declares a docking-ready receptor. Official validation reports and experimental maps were not independently inspected.