STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Original experimental coordinate assessment

11OA · DNMT3A PWWP1

Label protein chain F · author chain(s) F · canonical annotation core 292–350

assessed from original mmcifrequires structural reviewELECTRON MICROSCOPY
Original deposited structureProtein/domain evidenceOriginal-coordinate 3D viewerDownload record as JSON
59 / 59Core Cα observations
59Residues with coordinates
198Missing heavy side-chain atoms in observed residues
0Verified local PWWP research-ligand instances

Independent actual-atom audit

Core residue completeness

All residue records CSV

The annotation core is shown only at positions supported by the original protein/entity-to-UniProt mapping. Unobserved residues are separate from observed residues whose side chains lack deposited atoms. Partial occupancies and alternate conformations are recorded independently.

CanonicalAuthor residueComponentSource presenceObserved heavy atomsMissing backbone atomsMissing side-chain atomsAlternate/occupancy warnings
292F:292ILEObserved5CD1, CG1, CG2
293F:293GLYObserved4None
294F:294GLUObserved5CD, CG, OE1, OE2
295F:295LEUObserved5CD1, CD2, CG
296F:296VALObserved5CG1, CG2
297F:297TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
298F:298GLYObserved4None
299F:299LYSObserved5CD, CE, CG, NZ
300F:300LEUObserved5CD1, CD2, CG
301F:301ARGObserved5CD, CG, CZ, NE, NH1, NH2
302F:302GLYObserved4None
303F:303PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
304F:304SERObserved5OG
305F:305TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
306F:306TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
307F:307PROObserved5CD, CG
308F:308GLYObserved4None
309F:309ARGObserved5CD, CG, CZ, NE, NH1, NH2
310F:310ILEObserved5CD1, CG1, CG2
311F:311VALObserved5CG1, CG2
312F:312SERObserved5OG
313F:313TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
314F:314TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
315F:315METObserved5CE, CG, SD
316F:316THRObserved5CG2, OG1
317F:317GLYObserved4None
318F:318ARGObserved5CD, CG, CZ, NE, NH1, NH2
319F:319SERObserved5OG
320F:320ARGObserved5CD, CG, CZ, NE, NH1, NH2
321F:321ALAObserved5None
322F:322ALAObserved5None
323F:323GLUObserved5CD, CG, OE1, OE2
324F:324GLYObserved4None
325F:325THRObserved5CG2, OG1
326F:326ARGObserved5CD, CG, CZ, NE, NH1, NH2
327F:327TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
328F:328VALObserved5CG1, CG2
329F:329METObserved5CE, CG, SD
330F:330TRPObserved5CD1, CD2, CE2, CE3, CG, CH2, CZ2, CZ3, NE1
331F:331PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
332F:332GLYObserved4None
333F:333ASPObserved5CG, OD1, OD2
334F:334GLYObserved4None
335F:335LYSObserved5CD, CE, CG, NZ
336F:336PHEObserved5CD1, CD2, CE1, CE2, CG, CZ
337F:337SERObserved5OG
338F:338VALObserved5CG1, CG2
339F:339VALObserved5CG1, CG2
340F:340CYSObserved5SG
341F:341VALObserved5CG1, CG2
342F:342GLUObserved5CD, CG, OE1, OE2
343F:343LYSObserved5CD, CE, CG, NZ
344F:344LEUObserved5CD1, CD2, CG
345F:345METObserved5CE, CG, SD
346F:346PROObserved5CD, CG
347F:347LEUObserved5CD1, CD2, CG
348F:348SERObserved5OG
349F:349SERObserved5OG
350F:350PHEObserved5CD1, CD2, CE1, CE2, CG, CZ

Exact deposited instances

Experimentally defined PWWP ligand environments

No actual PWWP research-ligand environment was established by the available Phase 6C coordinates. This does not imply that the domain is inactive or that no ligands have been reported elsewhere.

Source and interpretation

PDB source: 11OA; domain: UP:Q9Y6K1:PWWP1.

Original coordinate SHA-256: 22b69191b56482b52a2cc8a8a6f517b143b90300e647239a8ef53c45b3c5873c. The program never creates modeled missing atoms, rescores affinities, or declares a docking-ready receptor. Official validation reports and experimental maps were not independently inspected.