| UNC8325PREP:UNC8325 |
NSD2 PWWP1 Construct not curatedHomo sapiens |
KdSPR Kddirect binding affinity |
= 41 ± 19 nM0.041 µM · exact unit conversion |
Experimental context- Replicates
- 3 independent experiments
- Uncertainty definition
- SD
- Temperature
- °C
- Buffer
- Not curated
- Conditions
- Not curated
- Qualification
- Exact domain is stated; assay construct boundaries and full buffer were not independently recovered. Original table image and supporting SPR panel inspected.
|
PMID:38965384 · 2024Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structuresOriginal observation record{
"assay_construct_end": null,
"assay_construct_start": null,
"assay_context": "purified_domain",
"assay_organism": "Homo sapiens",
"assay_record_id": "PWWP5:ASSAY:0018",
"assay_type": "SPR Kd",
"assay_value_transferred_to_modeled_stereoisomers": false,
"ccd_id": null,
"chemical_id": null,
"compound_name": "UNC8325",
"conditions": {},
"domain": "PWWP1",
"domain_id": "UP:O96028:PWWP1",
"endpoint": "Kd",
"evidence_class": "direct_binding_affinity",
"evidence_location": "Table 1; Supplementary Figure 1",
"evidence_url": "https://www.nature.com/articles/s41589-024-01660-y",
"gene": "NSD2",
"inclusion_rationale": "Primary source explicitly identifies this preparation, target context and observation.",
"is_negative": false,
"numeric_transcription_status": "source_preserved",
"numeric_value_inferred_from_structure": false,
"pdb_id": null,
"preparation_id": "PREP:UNC8325",
"protein_id": "UP:O96028",
"publication_year": 2024,
"reference_id": "PMID:38965384",
"remaining_uncertainty": "Exact domain is stated; assay construct boundaries and full buffer were not independently recovered. Original table image and supporting SPR panel inspected.",
"replicates": "3 independent experiments",
"retrieval_date": "2026-10-26",
"role": "reported_degrader",
"source_id": "P5:S:NIE2024",
"source_reported_uncertainty": "19",
"source_reported_units": "nM",
"source_reported_value": "41",
"source_verification_scope": "Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structures",
"uncertainty": 19,
"uncertainty_type": "SD",
"uncertainty_uM": 0.019,
"units": "nM",
"value": 41,
"value_operator": "=",
"value_uM": 0.041,
"verification_level": "primary_source_verified",
"version": "phase5.chemical_curation.1.1.0"
} |
| UNC8325PREP:UNC8325 |
NSD2 · protein-level evidence Construct not curatedHomo sapiens |
DmaxIn-cell western degradationcellular protein degradation |
= 71 ± 3 percent |
Experimental context- Replicates
- 3 independent experiments
- Uncertainty definition
- SD
- Temperature
- °C
- Buffer
- Not curated
- Conditions
- {'cell_line': 'U2OS'}
- Qualification
- Cell line confirmed in Supplementary Figure 2; exact duration not filled from a different experiment.
|
PMID:38965384 · 2024Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structuresOriginal observation record{
"assay_construct_end": null,
"assay_construct_start": null,
"assay_context": "cellular_full_protein",
"assay_organism": "Homo sapiens",
"assay_record_id": "PWWP5:ASSAY:0019",
"assay_type": "In-cell western degradation",
"assay_value_transferred_to_modeled_stereoisomers": false,
"ccd_id": null,
"chemical_id": null,
"compound_name": "UNC8325",
"conditions": {
"cell_line": "U2OS"
},
"domain": null,
"domain_id": null,
"endpoint": "Dmax",
"evidence_class": "cellular_protein_degradation",
"evidence_location": "Table 1; Supplementary Figure 2",
"evidence_url": "https://www.nature.com/articles/s41589-024-01660-y",
"gene": "NSD2",
"inclusion_rationale": "Primary source explicitly identifies this preparation, target context and observation.",
"is_negative": false,
"numeric_transcription_status": "source_preserved",
"numeric_value_inferred_from_structure": false,
"pdb_id": null,
"preparation_id": "PREP:UNC8325",
"protein_id": "UP:O96028",
"publication_year": 2024,
"reference_id": "PMID:38965384",
"remaining_uncertainty": "Cell line confirmed in Supplementary Figure 2; exact duration not filled from a different experiment.",
"replicates": "3 independent experiments",
"retrieval_date": "2026-10-26",
"role": "reported_degrader",
"source_id": "P5:S:NIE2024",
"source_reported_uncertainty": "3",
"source_reported_units": "percent",
"source_reported_value": "71",
"source_verification_scope": "Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structures",
"uncertainty": 3,
"uncertainty_type": "SD",
"uncertainty_uM": null,
"units": "percent",
"value": 71,
"value_operator": "=",
"value_uM": null,
"verification_level": "primary_source_verified",
"version": "phase5.chemical_curation.1.1.0"
} |
| UNC8325PREP:UNC8325 |
NSD2 · protein-level evidence Construct not curatedHomo sapiens |
DC50In-cell western degradationcellular protein degradation |
= 0.71 ± 0.25 µM0.71 µM · exact unit conversion |
Experimental context- Replicates
- 3 independent experiments
- Uncertainty definition
- SD
- Temperature
- °C
- Buffer
- Not curated
- Conditions
- {'cell_line': 'U2OS'}
- Qualification
- Cell line confirmed in Supplementary Figure 2; exact duration not filled from a different experiment.
|
PMID:38965384 · 2024Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structuresOriginal observation record{
"assay_construct_end": null,
"assay_construct_start": null,
"assay_context": "cellular_full_protein",
"assay_organism": "Homo sapiens",
"assay_record_id": "PWWP5:ASSAY:0020",
"assay_type": "In-cell western degradation",
"assay_value_transferred_to_modeled_stereoisomers": false,
"ccd_id": null,
"chemical_id": null,
"compound_name": "UNC8325",
"conditions": {
"cell_line": "U2OS"
},
"domain": null,
"domain_id": null,
"endpoint": "DC50",
"evidence_class": "cellular_protein_degradation",
"evidence_location": "Table 1; Supplementary Figure 2",
"evidence_url": "https://www.nature.com/articles/s41589-024-01660-y",
"gene": "NSD2",
"inclusion_rationale": "Primary source explicitly identifies this preparation, target context and observation.",
"is_negative": false,
"numeric_transcription_status": "source_preserved",
"numeric_value_inferred_from_structure": false,
"pdb_id": null,
"preparation_id": "PREP:UNC8325",
"protein_id": "UP:O96028",
"publication_year": 2024,
"reference_id": "PMID:38965384",
"remaining_uncertainty": "Cell line confirmed in Supplementary Figure 2; exact duration not filled from a different experiment.",
"replicates": "3 independent experiments",
"retrieval_date": "2026-10-26",
"role": "reported_degrader",
"source_id": "P5:S:NIE2024",
"source_reported_uncertainty": "0.25",
"source_reported_units": "\u00b5M",
"source_reported_value": "0.71",
"source_verification_scope": "Official publisher Table 1 image visually inspected; table footnote and Supplementary Figures 1-2 inspected; identities compared to primary structures",
"uncertainty": 0.25,
"uncertainty_type": "SD",
"uncertainty_uM": 0.25,
"units": "\u00b5M",
"value": 0.71,
"value_operator": "=",
"value_uM": 0.71,
"verification_level": "primary_source_verified",
"version": "phase5.chemical_curation.1.1.0"
} |