STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

9FOE · A1IEF

UP:O96028:PWWP1 · protein label chain A · ligand label chain B · model 1

Original structure and viewer
14Protein-chain contacts within 5 Å
17Protein-chain contacts within 6 Å
6Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:9FOE:LIG:B:A1IEF:401:.:SITE:UP:O96028:PWWP1:A
Original mmCIF SHA-256
f2b013ad297bf526cad83328b7e95e1b56e2e8ecd819ac082835ffadc0108034
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
13 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
69GLU2721523.124 ÅOE1 · N5
67ALA2701463.227 ÅN · N1
33TRP236483.397 ÅCZ2 · C3
66ASP2691453.412 ÅN · N1
30TYR233453.416 ÅOH · N4
118GLNUnmappedUnqualified3.451 ÅNE2 · O
63PHE2661423.472 ÅCD1 · C1
65GLY2681443.695 ÅCA · N1
64PHE2671433.785 ÅO · C6
27VAL230324.338 ÅCG2 · C
70ARG2731534.353 ÅO · C11
31PRO234464.726 ÅO · C
71ALA2741544.875 ÅCB · C11
115LEUUnmappedUnqualified4.940 ÅCD1 · C2
68PROUnmappedUnqualified5.454 ÅN · N1
25SER228305.492 ÅO · C
119TRPUnmappedUnqualified5.816 ÅN · C4

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
115LEU—single / commonNoneNone
118GLN—single / commonNoneNone
30TYR233single / commonNoneNone
33TRP236single / commonNoneNone
63PHE266single / commonNoneNone
66ASP269single / commonNoneNone
67ALA270single / commonNoneNone
68PRO—single / commonNoneNone
69GLU272single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays