STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

8Z6C · A1D73

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain G · model 1

Original structure and viewer
9Protein-chain contacts within 5 Å
14Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:8Z6C:LIG:G:A1D73:101:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
a52b0ce0d915a4ec6357f5dce14e0dbbacdb5fa856c24981a9187cf4168156c2
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
14 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
49GLU491522.492 ÅOE1 · N11
47THR471452.627 ÅOG1 · N10
15MET15323.235 ÅCE · N03
18TYR18453.329 ÅCE2 · C05
21TRP21483.567 ÅCE2 · C09
44PHE441423.627 ÅCG · C09
19PRO19464.554 ÅO · BR12
13ALA13304.723 ÅO · BR12
51ALA511544.824 ÅCB · C02
16LYS16435.160 ÅO · C04
50THR501535.233 ÅO · C01
45PHE451435.585 ÅO · C09
48HIS481465.594 ÅN · N10
14LYS14315.708 ÅC · BR12

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
15MET15single / commonNoneNone
18TYR18single / commonNoneNone
21TRP21single / commonNoneNone
44PHE44single / commonNoneNone
47THR47single / commonNoneNone
49GLU49single / commonNoneNone
50THR50single / commonNoneNone
51ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays