Experimental structure
8QZM
Structure of DNMT3A1 UDR region bound to H2AK119ub nucleosome
Original coordinates
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Coordinate coverage
Mapped chains
Label and author chain identifiers are kept separately. Observed Cα counts refer to each mapped annotation core.
| Protein | Label chain | Author chain | Domain | Observed Cα / core | Observed substitutions |
|---|---|---|---|---|---|
| DNMT3A | K | ["K"] | UP:Q9Y6K1:PWWP1 | 0 / 59 | 0 |
Chemical identity
Chemical components and interpretation
| CCD | Name | Role | Full InChIKey |
|---|---|---|---|
| No non-water chemical component in the curated inventory. | |||
Geometry, with defined scope
Independent contact evidence
Inspect 0 retained contact records
| CCD / instance | Protein chain | Contact class | Minimum core / broader domain distance Å |
|---|---|---|---|
| No retained positive proximity record. | |||
Biological partners
Histone H3 (Fragment) · histone or histone peptide · label chains ["A","E"]
Histone H4 · histone or histone peptide · label chains ["B","F"]
Histone H2A type 1 · histone or histone peptide · label chains ["C","G"]
Histone H2B type 1-C/E/F/G/I · histone or histone peptide · label chains ["D","H"]
DNA (145-MER) · nucleic acid · label chains ["I"]
DNA (145-MER) · nucleic acid · label chains ["J"]
Source interpretation
Focused scientific audit
retain with stated interpretation/caveats. Associated DNMT3A UDR-nucleosome structure with no observed PWWP core. Source association does not justify PWWP comparative inclusion.