Experimental structure
7HGB
PanDDA analysis group deposition -- Crystal structure of HRP-2 PWWP domain in complex with Z33297786
Original coordinates
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Original coordinates are available from a locally verified historical archive or the bundled source and load on request.
Coordinate coverage
Mapped chains
Label and author chain identifiers are kept separately. Observed Cα counts refer to each mapped annotation core.
| Protein | Label chain | Author chain | Domain | Observed Cα / core | Observed substitutions |
|---|---|---|---|---|---|
| HDGFL2 | A | ["A"] | UP:Q7Z4V5:PWWP1 | 58 / 58 | 1 |
| HDGFL2 | B | ["B"] | UP:Q7Z4V5:PWWP1 | 54 / 58 | 1 |
| HDGFL2 | C | ["C"] | UP:Q7Z4V5:PWWP1 | 53 / 58 | 1 |
Chemical identity
Chemical components and interpretation
| CCD | Name | Role | Full InChIKey |
|---|---|---|---|
| SO4 | SULFATE ION | ion/additive incidental | QAOWNCQODCNURD-UHFFFAOYSA-L |
| EDO | 1,2-ETHANEDIOL | cryoprotectant/additive incidental | LYCAIKOWRPUZTN-UHFFFAOYSA-N |
| A1A34 | 2-methoxy-N-[(4-methylphenyl)methyl]acetamide | experimentally deposited fragment functional | LZKKUVDCFSJGNG-UHFFFAOYSA-N |
| HOH | WATER | solvent incidental | XLYOFNOQVPJJNP-UHFFFAOYSA-N |
Geometry, with defined scope
Independent contact evidence
Inspect 12 retained contact records
| CCD / instance | Protein chain | Contact class | Minimum core / broader domain distance Å |
|---|---|---|---|
| A1A34 · J | HDGFL2 · A | native annotation core contact | 3.36 / 3.36 |
| A1A34 · J | HDGFL2 · B | native annotation core contact | 2.77 / 2.77 |
| EDO · F | HDGFL2 · A | native annotation core contact | 2.54 / 2.54 |
| EDO · K | HDGFL2 · C | native annotation core contact | 2.87 / 2.87 |
| SO4 · D | HDGFL2 · A | broader Pfam PWWP contact | 5.67 / 3.34 |
| SO4 · E | HDGFL2 · A | native annotation core contact | 2.72 / 2.72 |
| SO4 · G | HDGFL2 · A | broader Pfam PWWP contact | 5.93 / 2.65 |
| SO4 · H | HDGFL2 · A | native annotation core contact | 2.95 / 2.95 |
| SO4 · H | HDGFL2 · B | broader Pfam PWWP contact | 5.86 / 2.87 |
| SO4 · I | HDGFL2 · B | native annotation core contact | 2.58 / 2.58 |
| SO4 · G | HDGFL2 · C | broader Pfam PWWP contact | 9.48 / 3.28 |
| SO4 · L | HDGFL2 · C | native annotation core contact | 2.4 / 2.4 |
Biological partners
No curated macromolecular partner record.
Source interpretation
Focused scientific audit
This entry was included in all-entry coordinate/contact calculations but not in the 36-entry focused structural sample.