STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Experimental structure

3QJ6

The crystal structure of PWWP domain of human Hepatoma-derived growth factor 2 in complex with H3K79me3 peptide

Complexes PWWP coordinates observed X-RAY DIFFRACTION

Original coordinates

Explore the structure

PDB deposition
3QJ6 Deposited model
Your molecular view is ready

Load the deposited coordinates to rotate, zoom and inspect the structure.

Drag to rotate · scroll or pinch to zoom. Keyboard: focus the view, then use arrow keys to rotate, + / − to zoom, and Home to reset.

Original coordinates are available from a locally verified historical archive or the bundled source and load on request.

Coordinate coverage

Mapped chains

1 chain / domain rows

Label and author chain identifiers are kept separately. Observed Cα counts refer to each mapped annotation core.

ProteinLabel chainAuthor chainDomainObserved Cα / coreObserved substitutions
HDGFL2A["A"]UP:Q7Z4V5:PWWP156 / 580

Chemical identity

Chemical components and interpretation

3 component records
CCDNameRoleFull InChIKey
SO4SULFATE IONion/additive
incidental
QAOWNCQODCNURD-UHFFFAOYSA-L
UNXUNKNOWN ATOM OR IONunknown chemical component
unknown
Unresolved
HOHWATERsolvent
incidental
XLYOFNOQVPJJNP-UHFFFAOYSA-N

Geometry, with defined scope

Independent contact evidence

Inspect 4 retained contact records
CCD / instanceProtein chainContact classMinimum core / broader domain distance Å
M3L · BHDGFL2 · Anative annotation core contact2.74 / 2.74
SO4 · CHDGFL2 · Anative annotation core contact2.64 / 2.64
UNX · DHDGFL2 · Aisolated construct contact outside annotations5.66 / 5.66
UNX · EHDGFL2 · Anative annotation core contact3.48 / 3.22

Biological partners

H3K79me3 · protein/peptide · label chains ["B"]

Source interpretation

Focused scientific audit

Full review queue

This entry was included in all-entry coordinate/contact calculations but not in the 36-entry focused structural sample.