STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

9LQ1 · DNMT3A PWWP1

Source chain D, canonical annotation-core residues 292–350. ELECTRON MICROSCOPY · reported 3.36 Å. Original-coordinate SHA-256: ff559ef574bf8cfb35dd3505de2691ab2f1530c37785d7eb2d079817963acbf5.

0Core residues with observed coordinates (59 annotated)
0Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
1000000

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
292 / 292ILENo coordinates————
293 / 293GLYNo coordinates————
294 / 294GLUNo coordinates————
295 / 295LEUNo coordinates————
296 / 296VALNo coordinates————
297 / 297TRPNo coordinates————
298 / 298GLYNo coordinates————
299 / 299LYSNo coordinates————
300 / 300LEUNo coordinates————
301 / 301ARGNo coordinates————
302 / 302GLYNo coordinates————
303 / 303PHENo coordinates————
304 / 304SERNo coordinates————
305 / 305TRPNo coordinates————
306 / 306TRPNo coordinates————
307 / 307PRONo coordinates————
308 / 308GLYNo coordinates————
309 / 309ARGNo coordinates————
310 / 310ILENo coordinates————
311 / 311VALNo coordinates————
312 / 312SERNo coordinates————
313 / 313TRPNo coordinates————
314 / 314TRPNo coordinates————
315 / 315METNo coordinates————
316 / 316THRNo coordinates————
317 / 317GLYNo coordinates————
318 / 318ARGNo coordinates————
319 / 319SERNo coordinates————
320 / 320ARGNo coordinates————
321 / 321ALANo coordinates————
322 / 322ALANo coordinates————
323 / 323GLUNo coordinates————
324 / 324GLYNo coordinates————
325 / 325THRNo coordinates————
326 / 326ARGNo coordinates————
327 / 327TRPNo coordinates————
328 / 328VALNo coordinates————
329 / 329METNo coordinates————
330 / 330TRPNo coordinates————
331 / 331PHENo coordinates————
332 / 332GLYNo coordinates————
333 / 333ASPNo coordinates————
334 / 334GLYNo coordinates————
335 / 335LYSNo coordinates————
336 / 336PHENo coordinates————
337 / 337SERNo coordinates————
338 / 338VALNo coordinates————
339 / 339VALNo coordinates————
340 / 340CYSNo coordinates————
341 / 341VALNo coordinates————
342 / 342GLUNo coordinates————
343 / 343LYSNo coordinates————
344 / 344LEUNo coordinates————
345 / 345METNo coordinates————
346 / 346PRONo coordinates————
347 / 347LEUNo coordinates————
348 / 348SERNo coordinates————
349 / 349SERNo coordinates————
350 / 350PHENo coordinates————

Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.