Measured experimental coordinates · Phase 6C.1
9GRS · HDGFL2 PWWP1
Source chain A, canonical annotation-core residues 7–64. X-RAY DIFFRACTION · reported 1.66 Å. Original-coordinate SHA-256: ea6962be06f3f0d1f1eafd6f9dc63f52f2ac283158251f34bbd80282a812975c.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 58 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
A1H6Y · calculated observed ligand environment
Deposited instance PDB:9GRS:LIG:G:A1H6Y:101:.. Closest calculated PWWP-region atom distance: 3.3535 Å. Five-Å native core contacts: 2; broader-Pfam contacts: 0; source-coordinate model 1.
Limitations: partial occupancy contact atoms; multi chain environment source annotation
| Canonical residue | Region | Protein atom | Ligand atom | Distance (Å) | Occupancy |
|---|---|---|---|---|---|
| 30 ASP | native annotation core | C | O1 | 3.4472 | 1.0 / 0.81 |
| 31 GLY | native annotation core | CA | O1 | 3.3535 | 1.0 / 0.81 |
| 32 ALA | native annotation core | N | O1 | 5.5253 | 1.0 / 0.81 |
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 7 / 8 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 8 / 9 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 9 / 10 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 10 / 11 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 11 / 12 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 12 / 13 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 13 / 14 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 14 / 15 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 15 / 16 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 16 / 17 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 17 / 18 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 18 / 19 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 19 / 20 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 20 / 21 | HIS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 21 / 22 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 22 / 23 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 23 / 24 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 24 / 25 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 25 / 26 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 26 / 27 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 27 / 28 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 28 / 29 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 29 / 30 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 30 / 31 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 31 / 32 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 32 / 33 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 33 / 34 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 34 / 35 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 35 / 36 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 36 / 37 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 37 / 38 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 38 / 39 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 39 / 40 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 40 / 41 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 41 / 42 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 42 / 43 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 43 / 44 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 44 / 45 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 45 / 46 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 46 / 47 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 47 / 48 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 48 / 49 | HIS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 49 / 50 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 50 / 51 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 51 / 52 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 52 / 53 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 53 / 54 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 54 / 55 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 55 / 56 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 56 / 57 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 57 / 58 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 58 / 59 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 59 / 60 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 60 / 61 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 61 / 62 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 62 / 63 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 63 / 64 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 64 / 65 | CYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.