Measured experimental coordinates · Phase 6C.1

9G94 · HDGFL2 PWWP1

Source chain A, canonical annotation-core residues 7–64. X-RAY DIFFRACTION · reported 1.73 Å. Original-coordinate SHA-256: 77cc947e76da8d5e49e56df359b3db472fe81dbdfabfc36f99d53b3c18200802.

58Core residues with observed coordinates (58 annotated)

0Missing heavy side-chain atoms in observed core

1Experimental models evaluated

2Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

Model	Core residues observed	Missing backbone	Missing side-chain (union)	Missing side-chain (consistent conformer)	Partial occupancy residues	Unassessable chemistry
1	58	0	0	0	1	0

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

A1D73 · calculated observed ligand environment

Deposited instance PDB:9G94:LIG:D:A1D73:101:.. Closest calculated PWWP-region atom distance: 2.2634 Å. Five-Å native core contacts: 8; broader-Pfam contacts: 0; source-coordinate model 1.

Limitations: partial occupancy contact atoms

Canonical residue	Region	Protein atom	Ligand atom	Distance (Å)	Occupancy
13 ALA	native annotation core	O	BR12	5.0761	1.0 / 0.5
14 LYS	native annotation core	C	BR12	5.8011	1.0 / 0.5
15 MET	native annotation core	CE	N03	3.3375	1.0 / 0.5
18 TYR	native annotation core	CG	BR12	3.4631	1.0 / 0.5
19 PRO	native annotation core	O	BR12	5.0801	1.0 / 0.5
21 TRP	native annotation core	CE2	C09	3.331	1.0 / 0.5
44 PHE	native annotation core	CB	N10	3.4811	1.0 / 0.5
45 PHE	native annotation core	O	N10	5.0615	1.0 / 0.5
47 THR	native annotation core	OG1	N10	2.2634	1.0 / 0.5
48 HIS	native annotation core	N	N10	5.348	1.0 / 0.5
49 GLU	native annotation core	OE1	N11	3.1637	1.0 / 0.5
50 THR	native annotation core	O	C04	3.8878	1.0 / 0.5
51 ALA	native annotation core	CB	C04	3.5295	1.0 / 0.5

A1D73 · calculated observed ligand environment

Deposited instance PDB:9G94:LIG:G:A1D73:101:.. Closest calculated PWWP-region atom distance: 4.9223 Å. Five-Å native core contacts: 1; broader-Pfam contacts: 0; source-coordinate model 1.

Limitations: partial occupancy contact atoms; multi chain environment source annotation

Canonical residue	Region	Protein atom	Ligand atom	Distance (Å)	Occupancy
30 ASP	native annotation core	CB	N11	4.9223	1.0 / 0.57
31 GLY	native annotation core	N	N10	5.3323	1.0 / 0.57

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity position	Component	Observed	Missing backbone	Missing side-chain (union)	Missing side-chain (consistent)	Alt & occupancy
7 / 8	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
8 / 9	GLY	Yes	—	—	—	—; occupancy ≥ 1.0
9 / 10	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
10 / 11	LEU	Yes	—	—	—	—; occupancy ≥ 1.0
11 / 12	VAL	Yes	—	—	—	—; occupancy ≥ 1.0
12 / 13	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
13 / 14	ALA	Yes	—	—	—	—; occupancy ≥ 1.0
14 / 15	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
15 / 16	MET	Yes	—	—	—	—; occupancy ≥ 1.0
16 / 17	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
17 / 18	GLY	Yes	—	—	—	—; occupancy ≥ 1.0
18 / 19	TYR	Yes	—	—	—	—; occupancy ≥ 1.0
19 / 20	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
20 / 21	HIS	Yes	—	—	—	—; occupancy ≥ 1.0
21 / 22	TRP	Yes	—	—	—	—; occupancy ≥ 1.0
22 / 23	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
23 / 24	ALA	Yes	—	—	—	—; occupancy ≥ 1.0
24 / 25	ARG	Yes	—	—	—	—; occupancy ≥ 1.0
25 / 26	ILE	Yes	—	—	—	—; occupancy ≥ 1.0
26 / 27	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
27 / 28	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
28 / 29	ILE	Yes	—	—	—	—; occupancy ≥ 1.0
29 / 30	ALA	Yes	—	—	—	—; occupancy ≥ 1.0
30 / 31	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
31 / 32	GLY	Yes	—	—	—	—; occupancy ≥ 1.0
32 / 33	ALA	Yes	—	—	—	—; occupancy ≥ 1.0
33 / 34	VAL	Yes	—	—	—	—; occupancy ≥ 1.0
34 / 35	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
35 / 36	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
36 / 37	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
37 / 38	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
38 / 39	ASN	Yes	—	—	—	—; occupancy ≥ 1.0
39 / 40	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
40 / 41	TYR	Yes	—	—	—	—; occupancy ≥ 1.0
41 / 42	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
42 / 43	ILE	Yes	—	—	—	—; occupancy ≥ 1.0
43 / 44	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
44 / 45	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
45 / 46	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
46 / 47	GLY	Yes	—	—	—	—; occupancy ≥ 1.0
47 / 48	THR	Yes	—	—	—	—; occupancy ≥ 1.0
48 / 49	HIS	Yes	—	—	—	—; occupancy ≥ 1.0
49 / 50	GLU	Yes	—	—	—	—; occupancy ≥ 1.0
50 / 51	THR	Yes	—	—	—	—; occupancy ≥ 1.0
51 / 52	ALA	Yes	—	—	—	—; occupancy ≥ 1.0
52 / 53	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
53 / 54	LEU	Yes	—	—	—	—; occupancy ≥ 1.0
54 / 55	GLY	Yes	—	—	—	—; occupancy ≥ 1.0
55 / 56	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
56 / 57	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
57 / 58	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
58 / 59	LEU	Yes	—	—	—	—; occupancy ≥ 1.0
59 / 60	PHE	Yes	—	—	—	—; occupancy ≥ 1.0
60 / 61	PRO	Yes	—	—	—	—; occupancy ≥ 1.0
61 / 62	TYR	Yes	—	—	—	—; occupancy ≥ 1.0
62 / 63	ASP	Yes	—	—	—	—; occupancy ≥ 1.0
63 / 64	LYS	Yes	—	—	—	—; occupancy ≥ 1.0
64 / 65	CYS	Yes	—	—	—	A, B; occupancy ≥ 0.25

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