Measured experimental coordinates · Phase 6C.1
9E3D · DNMT3B PWWP1
Source chain T, canonical annotation-core residues 225–283. ELECTRON MICROSCOPY · reported 3.8 Å. Original-coordinate SHA-256: 1ecd570bd9149e4cd656c2aa2583a68edd145e94b5aef1270b824caafded6854.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 225 / 225 | ILE | No coordinates | — | — | — | — |
| 226 / 226 | GLY | No coordinates | — | — | — | — |
| 227 / 227 | ASP | No coordinates | — | — | — | — |
| 228 / 228 | LEU | No coordinates | — | — | — | — |
| 229 / 229 | VAL | No coordinates | — | — | — | — |
| 230 / 230 | TRP | No coordinates | — | — | — | — |
| 231 / 231 | GLY | No coordinates | — | — | — | — |
| 232 / 232 | LYS | No coordinates | — | — | — | — |
| 233 / 233 | ILE | No coordinates | — | — | — | — |
| 234 / 234 | LYS | No coordinates | — | — | — | — |
| 235 / 235 | GLY | No coordinates | — | — | — | — |
| 236 / 236 | PHE | No coordinates | — | — | — | — |
| 237 / 237 | SER | No coordinates | — | — | — | — |
| 238 / 238 | TRP | No coordinates | — | — | — | — |
| 239 / 239 | TRP | No coordinates | — | — | — | — |
| 240 / 240 | PRO | No coordinates | — | — | — | — |
| 241 / 241 | ALA | No coordinates | — | — | — | — |
| 242 / 242 | MET | No coordinates | — | — | — | — |
| 243 / 243 | VAL | No coordinates | — | — | — | — |
| 244 / 244 | VAL | No coordinates | — | — | — | — |
| 245 / 245 | SER | No coordinates | — | — | — | — |
| 246 / 246 | TRP | No coordinates | — | — | — | — |
| 247 / 247 | LYS | No coordinates | — | — | — | — |
| 248 / 248 | ALA | No coordinates | — | — | — | — |
| 249 / 249 | THR | No coordinates | — | — | — | — |
| 250 / 250 | SER | No coordinates | — | — | — | — |
| 251 / 251 | LYS | No coordinates | — | — | — | — |
| 252 / 252 | ARG | No coordinates | — | — | — | — |
| 253 / 253 | GLN | No coordinates | — | — | — | — |
| 254 / 254 | ALA | No coordinates | — | — | — | — |
| 255 / 255 | MET | No coordinates | — | — | — | — |
| 256 / 256 | SER | No coordinates | — | — | — | — |
| 257 / 257 | GLY | No coordinates | — | — | — | — |
| 258 / 258 | MET | No coordinates | — | — | — | — |
| 259 / 259 | ARG | No coordinates | — | — | — | — |
| 260 / 260 | TRP | No coordinates | — | — | — | — |
| 261 / 261 | VAL | No coordinates | — | — | — | — |
| 262 / 262 | GLN | No coordinates | — | — | — | — |
| 263 / 263 | TRP | No coordinates | — | — | — | — |
| 264 / 264 | PHE | No coordinates | — | — | — | — |
| 265 / 265 | GLY | No coordinates | — | — | — | — |
| 266 / 266 | ASP | No coordinates | — | — | — | — |
| 267 / 267 | GLY | No coordinates | — | — | — | — |
| 268 / 268 | LYS | No coordinates | — | — | — | — |
| 269 / 269 | PHE | No coordinates | — | — | — | — |
| 270 / 270 | SER | No coordinates | — | — | — | — |
| 271 / 271 | GLU | No coordinates | — | — | — | — |
| 272 / 272 | VAL | No coordinates | — | — | — | — |
| 273 / 273 | SER | No coordinates | — | — | — | — |
| 274 / 274 | ALA | No coordinates | — | — | — | — |
| 275 / 275 | ASP | No coordinates | — | — | — | — |
| 276 / 276 | LYS | No coordinates | — | — | — | — |
| 277 / 277 | LEU | No coordinates | — | — | — | — |
| 278 / 278 | VAL | No coordinates | — | — | — | — |
| 279 / 279 | ALA | No coordinates | — | — | — | — |
| 280 / 280 | LEU | No coordinates | — | — | — | — |
| 281 / 281 | GLY | No coordinates | — | — | — | — |
| 282 / 282 | LEU | No coordinates | — | — | — | — |
| 283 / 283 | PHE | No coordinates | — | — | — | — |
Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.