STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

9E0F · DNMT3A PWWP1

Source chain C, canonical annotation-core residues 292–350. ELECTRON MICROSCOPY · reported 3.46 Å. Original-coordinate SHA-256: c51c139482765431ba619dab6da2645f54f56cb4408ea46bb5bb40b5dd78d3be.

0Core residues with observed coordinates (59 annotated)
0Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
1000000

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
292 / 69ILENo coordinates————
293 / 70GLYNo coordinates————
294 / 71GLUNo coordinates————
295 / 72LEUNo coordinates————
296 / 73VALNo coordinates————
297 / 74TRPNo coordinates————
298 / 75GLYNo coordinates————
299 / 76LYSNo coordinates————
300 / 77LEUNo coordinates————
301 / 78ARGNo coordinates————
302 / 79GLYNo coordinates————
303 / 80PHENo coordinates————
304 / 81SERNo coordinates————
305 / 82TRPNo coordinates————
306 / 83TRPNo coordinates————
307 / 84PRONo coordinates————
308 / 85GLYNo coordinates————
309 / 86ARGNo coordinates————
310 / 87ILENo coordinates————
311 / 88VALNo coordinates————
312 / 89SERNo coordinates————
313 / 90TRPNo coordinates————
314 / 91TRPNo coordinates————
315 / 92METNo coordinates————
316 / 93THRNo coordinates————
317 / 94GLYNo coordinates————
318 / 95ARGNo coordinates————
319 / 96SERNo coordinates————
320 / 97ARGNo coordinates————
321 / 98ALANo coordinates————
322 / 99ALANo coordinates————
323 / 100GLUNo coordinates————
324 / 101GLYNo coordinates————
325 / 102THRNo coordinates————
326 / 103ARGNo coordinates————
327 / 104TRPNo coordinates————
328 / 105VALNo coordinates————
329 / 106METNo coordinates————
330 / 107TRPNo coordinates————
331 / 108PHENo coordinates————
332 / 109GLYNo coordinates————
333 / 110ASPNo coordinates————
334 / 111GLYNo coordinates————
335 / 112LYSNo coordinates————
336 / 113PHENo coordinates————
337 / 114SERNo coordinates————
338 / 115VALNo coordinates————
339 / 116VALNo coordinates————
340 / 117CYSNo coordinates————
341 / 118VALNo coordinates————
342 / 119GLUNo coordinates————
343 / 120LYSNo coordinates————
344 / 121LEUNo coordinates————
345 / 122METNo coordinates————
346 / 123PRONo coordinates————
347 / 124LEUNo coordinates————
348 / 125SERNo coordinates————
349 / 126SERNo coordinates————
350 / 127PHENo coordinates————

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