Measured experimental coordinates · Phase 6C.1
9E05 · DNMT3A PWWP1
Source chain V, canonical annotation-core residues 292–350. ELECTRON MICROSCOPY · reported 8.0 Å. Original-coordinate SHA-256: 957fb6d2f1ce585cc6ad318afd40e73395f8168e08a28f2d17fd4e59cbb25e0e.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 59 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 292 / 69 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 293 / 70 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 294 / 71 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 295 / 72 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 296 / 73 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 297 / 74 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 298 / 75 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 299 / 76 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 300 / 77 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 301 / 78 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 302 / 79 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 303 / 80 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 304 / 81 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 305 / 82 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 306 / 83 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 307 / 84 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 308 / 85 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 309 / 86 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 310 / 87 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 311 / 88 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 312 / 89 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 313 / 90 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 314 / 91 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 315 / 92 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 316 / 93 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 317 / 94 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 318 / 95 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 319 / 96 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 320 / 97 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 321 / 98 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 322 / 99 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 323 / 100 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 324 / 101 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 325 / 102 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 326 / 103 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 327 / 104 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 328 / 105 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 329 / 106 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 330 / 107 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 331 / 108 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 332 / 109 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 333 / 110 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 334 / 111 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 335 / 112 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 336 / 113 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 337 / 114 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 338 / 115 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 339 / 116 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 340 / 117 | CYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 341 / 118 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 342 / 119 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 343 / 120 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 344 / 121 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 345 / 122 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 346 / 123 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 347 / 124 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 348 / 125 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 349 / 126 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 350 / 127 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.