STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

6OQM · MSH6 PWWP1

Source chain A, canonical annotation-core residues 92–154. X-RAY DIFFRACTION · reported 2.2 Å. Original-coordinate SHA-256: a56fb9d51ad4436d3d8bd187a570af2e5abb25e5e52e2e3b8d472ba15d2dfed5.

63Core residues with observed coordinates (63 annotated)
7Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
16307700

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
92 / 24PROYes————; occupancy ≥ 1.0
93 / 25GLYYes————; occupancy ≥ 1.0
94 / 26ASPYes————; occupancy ≥ 1.0
95 / 27LEUYes————; occupancy ≥ 1.0
96 / 28VALYes————; occupancy ≥ 1.0
97 / 29TRPYes————; occupancy ≥ 1.0
98 / 30ALAYes————; occupancy ≥ 1.0
99 / 31LYSYes————; occupancy ≥ 1.0
100 / 32METYes————; occupancy ≥ 1.0
101 / 33GLUYes————; occupancy ≥ 1.0
102 / 34GLYYes————; occupancy ≥ 1.0
103 / 35TYRYes————; occupancy ≥ 1.0
104 / 36PROYes————; occupancy ≥ 1.0
105 / 37TRPYes————; occupancy ≥ 1.0
106 / 38TRPYes————; occupancy ≥ 1.0
107 / 39PROYes————; occupancy ≥ 1.0
108 / 40CYSYes————; occupancy ≥ 1.0
109 / 41LEUYes————; occupancy ≥ 1.0
110 / 42VALYes————; occupancy ≥ 1.0
111 / 43TYRYes————; occupancy ≥ 1.0
112 / 44ASNYes————; occupancy ≥ 1.0
113 / 45HISYes————; occupancy ≥ 1.0
114 / 46PROYes————; occupancy ≥ 1.0
115 / 47PHEYes————; occupancy ≥ 1.0
116 / 48ASPYes————; occupancy ≥ 1.0
117 / 49GLYYes————; occupancy ≥ 1.0
118 / 50THRYes————; occupancy ≥ 1.0
119 / 51PHEYes————; occupancy ≥ 1.0
120 / 52ILEYes————; occupancy ≥ 1.0
121 / 53ARGYes————; occupancy ≥ 1.0
122 / 54GLUYes————; occupancy ≥ 1.0
123 / 55LYSYes————; occupancy ≥ 1.0
124 / 56GLYYes————; occupancy ≥ 1.0
125 / 57LYSYes—CE, NZCE, NZ—; occupancy ≥ 1.0
126 / 58SERYes————; occupancy ≥ 1.0
127 / 59VALYes————; occupancy ≥ 1.0
128 / 60ARGYes————; occupancy ≥ 1.0
129 / 61VALYes————; occupancy ≥ 1.0
130 / 62HISYes————; occupancy ≥ 1.0
131 / 63VALYes————; occupancy ≥ 1.0
132 / 64GLNYes————; occupancy ≥ 1.0
133 / 65PHEYes————; occupancy ≥ 1.0
134 / 66PHEYes————; occupancy ≥ 1.0
135 / 67ASPYes————; occupancy ≥ 1.0
136 / 68ASPYes————; occupancy ≥ 1.0
137 / 69SERYes————; occupancy ≥ 1.0
138 / 70PROYes————; occupancy ≥ 1.0
139 / 71THRYes————; occupancy ≥ 1.0
140 / 72ARGYes————; occupancy ≥ 1.0
141 / 73GLYYes————; occupancy ≥ 1.0
142 / 74TRPYes————; occupancy ≥ 1.0
143 / 75VALYes————; occupancy ≥ 1.0
144 / 76SERYes————; occupancy ≥ 1.0
145 / 77LYSYes—CE, NZCE, NZ—; occupancy ≥ 1.0
146 / 78ARGYes————; occupancy ≥ 1.0
147 / 79LEUYes————; occupancy ≥ 1.0
148 / 80LEUYes————; occupancy ≥ 1.0
149 / 81LYSYes—CD, CE, NZCD, CE, NZ—; occupancy ≥ 1.0
150 / 82PROYes————; occupancy ≥ 1.0
151 / 83TYRYes————; occupancy ≥ 1.0
152 / 84THRYes————; occupancy ≥ 1.0
153 / 85GLYYes————; occupancy ≥ 1.0
154 / 86SERYes————; occupancy ≥ 1.0

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