STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

6KCO · Jasper PWWP1

Source chain O, canonical annotation-core residues 12–63. X-RAY DIFFRACTION · reported 2.4 Å. Original-coordinate SHA-256: 1908307167dc1013e99bc623d1e80540e7a91ba95e5ebfacc697f469e30a5da4.

50Core residues with observed coordinates (52 annotated)
4Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
15004400

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
12 / 6ILEYes————; occupancy ≥ 1.0
13 / 7GLYYes————; occupancy ≥ 1.0
14 / 8ASPYes————; occupancy ≥ 1.0
15 / 9LEUYes————; occupancy ≥ 1.0
16 / 10VALYes————; occupancy ≥ 1.0
17 / 11PHEYes————; occupancy ≥ 1.0
18 / 12ALAYes————; occupancy ≥ 1.0
19 / 13LYSYes————; occupancy ≥ 1.0
20 / 14VALYes————; occupancy ≥ 1.0
21 / 15LYSYes————; occupancy ≥ 1.0
22 / 16GLYYes————; occupancy ≥ 1.0
23 / 17TYRYes————; occupancy ≥ 1.0
24 / 18PROYes————; occupancy ≥ 1.0
25 / 19PROYes————; occupancy ≥ 1.0
26 / 20TRPYes————; occupancy ≥ 1.0
27 / 21PROYes————; occupancy ≥ 1.0
28 / 22ALAYes————; occupancy ≥ 1.0
29 / 23LYSYes————; occupancy ≥ 1.0
30 / 24ILEYes————; occupancy ≥ 1.0
31 / 25THRYes————; occupancy ≥ 1.0
32 / 26LYSYes————; occupancy ≥ 1.0
33 / 27SERYes————; occupancy ≥ 1.0
34 / 28ASNYes————; occupancy ≥ 1.0
35 / 29ASNNo coordinates————
36 / 30ASNNo coordinates————
37 / 31LYSYes—CD, CE, CG, NZCD, CE, CG, NZ—; occupancy ≥ 1.0
38 / 32LYSYes————; occupancy ≥ 1.0
39 / 33TYRYes————; occupancy ≥ 1.0
40 / 34ASNYes————; occupancy ≥ 1.0
41 / 35VALYes————; occupancy ≥ 1.0
42 / 36TYRYes————; occupancy ≥ 1.0
43 / 37PHEYes————; occupancy ≥ 1.0
44 / 38TYRYes————; occupancy ≥ 1.0
45 / 39GLYYes————; occupancy ≥ 1.0
46 / 40THRYes————; occupancy ≥ 1.0
47 / 41GLYYes————; occupancy ≥ 1.0
48 / 42GLUYes————; occupancy ≥ 1.0
49 / 43THRYes————; occupancy ≥ 1.0
50 / 44ALAYes————; occupancy ≥ 1.0
51 / 45ASNYes————; occupancy ≥ 1.0
52 / 46ILEYes————; occupancy ≥ 1.0
53 / 47LYSYes————; occupancy ≥ 1.0
54 / 48LEUYes————; occupancy ≥ 1.0
55 / 49GLUYes————; occupancy ≥ 1.0
56 / 50ASPYes————; occupancy ≥ 1.0
57 / 51LEUYes————; occupancy ≥ 1.0
58 / 52PHEYes————; occupancy ≥ 1.0
59 / 53PROYes————; occupancy ≥ 1.0
60 / 54TYRYes————; occupancy ≥ 1.0
61 / 55ALAYes————; occupancy ≥ 1.0
62 / 56SERYes————; occupancy ≥ 1.0
63 / 57ASNYes————; occupancy ≥ 1.0

Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.