Measured experimental coordinates · Phase 6C.1
5XSK · Hdgf PWWP1
Source chain D, canonical annotation-core residues 12–69. X-RAY DIFFRACTION · reported 2.84 Å. Original-coordinate SHA-256: b89628174a715c4377f3feb9dff571ce75fd9e107b41754cfd62c314ed8f2985.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 58 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 12 / 32 | CYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 13 / 33 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 14 / 34 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 15 / 35 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 16 / 36 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 17 / 37 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 18 / 38 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 19 / 39 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 20 / 40 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 21 / 41 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 22 / 42 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 23 / 43 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 24 / 44 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 25 / 45 | HIS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 26 / 46 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 27 / 47 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 28 / 48 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 29 / 49 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 30 / 50 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 31 / 51 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 32 / 52 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 33 / 53 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 34 / 54 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 35 / 55 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 36 / 56 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 37 / 57 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 38 / 58 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 39 / 59 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 40 / 60 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 41 / 61 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 42 / 62 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 43 / 63 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 44 / 64 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 45 / 65 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 46 / 66 | GLN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 47 / 67 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 48 / 68 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 49 / 69 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 50 / 70 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 51 / 71 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 52 / 72 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 53 / 73 | HIS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 54 / 74 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 55 / 75 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 56 / 76 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 57 / 77 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 58 / 78 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 59 / 79 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 60 / 80 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 61 / 81 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 62 / 82 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 63 / 83 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 64 / 84 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 65 / 85 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 66 / 86 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 67 / 87 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 68 / 88 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 69 / 89 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
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