STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

3PFS · BRPF3 PWWP1

Source chain A, canonical annotation-core residues 1076–1159. X-RAY DIFFRACTION · reported 1.9 Å. Original-coordinate SHA-256: b4c99ae57b91da3164d714f3db6c7466119e64c40dfd8e260cd338d21d5a3ab8.

84Core residues with observed coordinates (84 annotated)
10Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
1840101000

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
1076 / 39PROYes————; occupancy ≥ 1.0
1077 / 40LEUYes————; occupancy ≥ 1.0
1078 / 41GLUYes————; occupancy ≥ 1.0
1079 / 42LEUYes————; occupancy ≥ 1.0
1080 / 43VALYes————; occupancy ≥ 1.0
1081 / 44TRPYes————; occupancy ≥ 1.0
1082 / 45ALAYes————; occupancy ≥ 1.0
1083 / 46LYSYes————; occupancy ≥ 1.0
1084 / 47CYSYes————; occupancy ≥ 1.0
1085 / 48ARGYes————; occupancy ≥ 1.0
1086 / 49GLYYes————; occupancy ≥ 1.0
1087 / 50TYRYes————; occupancy ≥ 1.0
1088 / 51PROYes————; occupancy ≥ 1.0
1089 / 52SERYes————; occupancy ≥ 1.0
1090 / 53TYRYes————; occupancy ≥ 1.0
1091 / 54PROYes————; occupancy ≥ 1.0
1092 / 55ALAYes————; occupancy ≥ 1.0
1093 / 56LEUYes————; occupancy ≥ 1.0
1094 / 57ILEYes————; occupancy ≥ 1.0
1095 / 58ILEYes————; occupancy ≥ 1.0
1096 / 59ASPYes————; occupancy ≥ 1.0
1097 / 60PROYes————; occupancy ≥ 1.0
1098 / 61LYSYes————; occupancy ≥ 1.0
1099 / 62METYes————; occupancy ≥ 1.0
1100 / 63PROYes————; occupancy ≥ 1.0
1101 / 64ARGYes————; occupancy ≥ 1.0
1102 / 65GLUYes————; occupancy ≥ 1.0
1103 / 66GLYYes————; occupancy ≥ 1.0
1104 / 67LEUYes————; occupancy ≥ 1.0
1105 / 68LEUYes————; occupancy ≥ 1.0
1106 / 69HISYes————; occupancy ≥ 1.0
1107 / 70ASNYes————; occupancy ≥ 1.0
1108 / 71GLYYes————; occupancy ≥ 1.0
1109 / 72VALYes————; occupancy ≥ 1.0
1110 / 73PROYes————; occupancy ≥ 1.0
1111 / 74ILEYes————; occupancy ≥ 1.0
1112 / 75PROYes————; occupancy ≥ 1.0
1113 / 76VALYes————; occupancy ≥ 1.0
1114 / 77PROYes————; occupancy ≥ 1.0
1115 / 78PROYes————; occupancy ≥ 1.0
1116 / 79LEUYes————; occupancy ≥ 1.0
1117 / 80ASPYes————; occupancy ≥ 1.0
1118 / 81VALYes————; occupancy ≥ 1.0
1119 / 82LEUYes————; occupancy ≥ 1.0
1120 / 83LYSYes————; occupancy ≥ 1.0
1121 / 84LEUYes————; occupancy ≥ 1.0
1122 / 85GLYYes————; occupancy ≥ 1.0
1123 / 86GLUYes—CD, CG, OE1, OE2CD, CG, OE1, OE2—; occupancy ≥ 1.0
1124 / 87GLNYes————; occupancy ≥ 1.0
1125 / 88LYSYes————; occupancy ≥ 1.0
1126 / 89GLNYes————; occupancy ≥ 1.0
1127 / 90ALAYes————; occupancy ≥ 1.0
1128 / 91GLUYes————; occupancy ≥ 1.0
1129 / 92ALAYes————; occupancy ≥ 1.0
1130 / 93GLYYes————; occupancy ≥ 1.0
1131 / 94GLUYes————; occupancy ≥ 1.0
1132 / 95LYSYes————; occupancy ≥ 1.0
1133 / 96LEUYes————; occupancy ≥ 1.0
1134 / 97PHEYes————; occupancy ≥ 1.0
1135 / 98LEUYes————; occupancy ≥ 1.0
1136 / 99VALYes————; occupancy ≥ 1.0
1137 / 100LEUYes————; occupancy ≥ 1.0
1138 / 101PHEYes————; occupancy ≥ 1.0
1139 / 102PHEYes————; occupancy ≥ 1.0
1140 / 103ASPYes————; occupancy ≥ 1.0
1141 / 104ASNYes————; occupancy ≥ 1.0
1142 / 105LYSYes————; occupancy ≥ 1.0
1143 / 106ARGYes————; occupancy ≥ 1.0
1144 / 107THRYes————; occupancy ≥ 1.0
1145 / 108TRPYes————; occupancy ≥ 1.0
1146 / 109GLNYes————; occupancy ≥ 1.0
1147 / 110TRPYes————; occupancy ≥ 1.0
1148 / 111LEUYes————; occupancy ≥ 1.0
1149 / 112PROYes————; occupancy ≥ 1.0
1150 / 113ARGYes—CD, CG, CZ, NE, NH1, NH2CD, CG, CZ, NE, NH1, NH2—; occupancy ≥ 1.0
1151 / 114ASPYes————; occupancy ≥ 1.0
1152 / 115LYSYes————; occupancy ≥ 1.0
1153 / 116VALYes————; occupancy ≥ 1.0
1154 / 117LEUYes————; occupancy ≥ 1.0
1155 / 118PROYes————; occupancy ≥ 1.0
1156 / 119LEUYes————; occupancy ≥ 1.0
1157 / 120GLYYes————; occupancy ≥ 1.0
1158 / 121VALYes————; occupancy ≥ 1.0
1159 / 122GLUYes————; occupancy ≥ 1.0

Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.