Measured experimental coordinates · Phase 6C.1
3LYI · BRD1 PWWP1
Source chain B, canonical annotation-core residues 929–1012. X-RAY DIFFRACTION · reported 2.1 Å. Original-coordinate SHA-256: daab1f3e3c0ac65876a2031e90670a8d78fe37c492066102a302bc9d9a917097.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 69 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 929 / 6 | PRO | No coordinates | — | — | — | — |
| 930 / 7 | LEU | No coordinates | — | — | — | — |
| 931 / 8 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 932 / 9 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 933 / 10 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 934 / 11 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 935 / 12 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 936 / 13 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 937 / 14 | CYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 938 / 15 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 939 / 16 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 940 / 17 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 941 / 18 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 942 / 19 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 943 / 20 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 944 / 21 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 945 / 22 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 946 / 23 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 947 / 24 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 948 / 25 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 949 / 26 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 950 / 27 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 951 / 28 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 952 / 29 | MET | No coordinates | — | — | — | — |
| 953 / 30 | PRO | No coordinates | — | — | — | — |
| 954 / 31 | ARG | No coordinates | — | — | — | — |
| 955 / 32 | VAL | No coordinates | — | — | — | — |
| 956 / 33 | PRO | No coordinates | — | — | — | — |
| 957 / 34 | GLY | No coordinates | — | — | — | — |
| 958 / 35 | HIS | No coordinates | — | — | — | — |
| 959 / 36 | HIS | No coordinates | — | — | — | — |
| 960 / 37 | ASN | No coordinates | — | — | — | — |
| 961 / 38 | GLY | No coordinates | — | — | — | — |
| 962 / 39 | VAL | No coordinates | — | — | — | — |
| 963 / 40 | THR | No coordinates | — | — | — | — |
| 964 / 41 | ILE | No coordinates | — | — | — | — |
| 965 / 42 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 966 / 43 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 967 / 44 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 968 / 45 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 969 / 46 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 970 / 47 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 971 / 48 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 972 / 49 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 973 / 50 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 974 / 51 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 975 / 52 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 976 / 53 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 977 / 54 | HIS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 978 / 55 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 979 / 56 | GLN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 980 / 57 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 981 / 58 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 982 / 59 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 983 / 60 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 984 / 61 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 985 / 62 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 986 / 63 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 987 / 64 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 988 / 65 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 989 / 66 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 990 / 67 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 991 / 68 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 992 / 69 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 993 / 70 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 994 / 71 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 995 / 72 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 996 / 73 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 997 / 74 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 998 / 75 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 999 / 76 | GLN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1000 / 77 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1001 / 78 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1002 / 79 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1003 / 80 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1004 / 81 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1005 / 82 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1006 / 83 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1007 / 84 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1008 / 85 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1009 / 86 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1010 / 87 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1011 / 88 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 1012 / 89 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
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