Measured experimental coordinates · Phase 6C.1
3LLR · DNMT3A PWWP1
Source chain D, canonical annotation-core residues 292–350. X-RAY DIFFRACTION · reported 2.3 Å. Original-coordinate SHA-256: a8254ced10f69b3b39f750fa8cd9287339657ffd15b2b87702acc775b16fc7ed.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 59 | 0 | 0 | 0 | 2 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 292 / 19 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 293 / 20 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 294 / 21 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 295 / 22 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 296 / 23 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 297 / 24 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 298 / 25 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 299 / 26 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 300 / 27 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 301 / 28 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 302 / 29 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 303 / 30 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 304 / 31 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 305 / 32 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 306 / 33 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 307 / 34 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 308 / 35 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 309 / 36 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 310 / 37 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 311 / 38 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 312 / 39 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 313 / 40 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 314 / 41 | TRP | Yes | — | — | — | A, B; occupancy ≥ 0.5 |
| 315 / 42 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 316 / 43 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 317 / 44 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 318 / 45 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 319 / 46 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 320 / 47 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 321 / 48 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 322 / 49 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 323 / 50 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 324 / 51 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 325 / 52 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 326 / 53 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 327 / 54 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 328 / 55 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 329 / 56 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 330 / 57 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 331 / 58 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 332 / 59 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 333 / 60 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 334 / 61 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 335 / 62 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 336 / 63 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 337 / 64 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 338 / 65 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 339 / 66 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 340 / 67 | CYS | Yes | — | — | — | A, B; occupancy ≥ 0.5 |
| 341 / 68 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 342 / 69 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 343 / 70 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 344 / 71 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 345 / 72 | MET | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 346 / 73 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 347 / 74 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 348 / 75 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 349 / 76 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 350 / 77 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
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