STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

2X4X · BRPF1 PWWP1

Source chain E, canonical annotation-core residues 1085–1168. X-RAY DIFFRACTION · reported 1.85 Å. Original-coordinate SHA-256: f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097.

84Core residues with observed coordinates (84 annotated)
0Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
18400010

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
1085 / 12ALAYes————; occupancy ≥ 1.0
1086 / 13LEUYes————; occupancy ≥ 1.0
1087 / 14ASPYes————; occupancy ≥ 1.0
1088 / 15LEUYes————; occupancy ≥ 1.0
1089 / 16VALYes————; occupancy ≥ 1.0
1090 / 17TRPYes————; occupancy ≥ 1.0
1091 / 18ALAYes————; occupancy ≥ 1.0
1092 / 19LYSYes————; occupancy ≥ 1.0
1093 / 20CYSYes————; occupancy ≥ 1.0
1094 / 21ARGYes————; occupancy ≥ 1.0
1095 / 22GLYYes————; occupancy ≥ 1.0
1096 / 23TYRYes————; occupancy ≥ 1.0
1097 / 24PROYes————; occupancy ≥ 1.0
1098 / 25SERYes————; occupancy ≥ 1.0
1099 / 26TYRYes————; occupancy ≥ 1.0
1100 / 27PROYes————; occupancy ≥ 1.0
1101 / 28ALAYes————; occupancy ≥ 1.0
1102 / 29LEUYes————; occupancy ≥ 1.0
1103 / 30ILEYes————; occupancy ≥ 1.0
1104 / 31ILEYes————; occupancy ≥ 1.0
1105 / 32ASPYes————; occupancy ≥ 1.0
1106 / 33PROYes————; occupancy ≥ 1.0
1107 / 34LYSYes————; occupancy ≥ 1.0
1108 / 35METYes————; occupancy ≥ 1.0
1109 / 36PROYes————; occupancy ≥ 1.0
1110 / 37ARGYes————; occupancy ≥ 1.0
1111 / 38GLUYes————; occupancy ≥ 1.0
1112 / 39GLYYes————; occupancy ≥ 1.0
1113 / 40METYes————; occupancy ≥ 1.0
1114 / 41PHEYes————; occupancy ≥ 1.0
1115 / 42HISYes————; occupancy ≥ 1.0
1116 / 43HISYes————; occupancy ≥ 1.0
1117 / 44GLYYes————; occupancy ≥ 1.0
1118 / 45VALYes————; occupancy ≥ 1.0
1119 / 46PROYes————; occupancy ≥ 1.0
1120 / 47ILEYes————; occupancy ≥ 1.0
1121 / 48PROYes————; occupancy ≥ 1.0
1122 / 49VALYes————; occupancy ≥ 1.0
1123 / 50PROYes————; occupancy ≥ 1.0
1124 / 51PROYes————; occupancy ≥ 1.0
1125 / 52LEUYes————; occupancy ≥ 1.0
1126 / 53GLUYes————; occupancy ≥ 1.0
1127 / 54VALYes————; occupancy ≥ 1.0
1128 / 55LEUYes————; occupancy ≥ 1.0
1129 / 56LYSYes————; occupancy ≥ 1.0
1130 / 57LEUYes————; occupancy ≥ 1.0
1131 / 58GLYYes————; occupancy ≥ 1.0
1132 / 59GLUYes————; occupancy ≥ 1.0
1133 / 60GLNYes————; occupancy ≥ 1.0
1134 / 61METYes————; occupancy ≥ 1.0
1135 / 62THRYes————; occupancy ≥ 1.0
1136 / 63GLNYes————; occupancy ≥ 1.0
1137 / 64GLUYes————; occupancy ≥ 1.0
1138 / 65ALAYes————; occupancy ≥ 1.0
1139 / 66ARGYes————; occupancy ≥ 1.0
1140 / 67GLUYes————; occupancy ≥ 1.0
1141 / 68HISYes————; occupancy ≥ 1.0
1142 / 69LEUYes————; occupancy ≥ 1.0
1143 / 70TYRYes————; occupancy ≥ 1.0
1144 / 71LEUYes————; occupancy ≥ 1.0
1145 / 72VALYes————; occupancy ≥ 1.0
1146 / 73LEUYes————; occupancy ≥ 1.0
1147 / 74PHEYes————; occupancy ≥ 1.0
1148 / 75PHEYes————; occupancy ≥ 1.0
1149 / 76ASPYes————; occupancy ≥ 1.0
1150 / 77ASNYes————; occupancy ≥ 1.0
1151 / 78LYSYes————; occupancy ≥ 1.0
1152 / 79ARGYes————; occupancy ≥ 1.0
1153 / 80THRYes————; occupancy ≥ 1.0
1154 / 81TRPYes————; occupancy ≥ 1.0
1155 / 82GLNYes————; occupancy ≥ 1.0
1156 / 83TRPYes————; occupancy ≥ 1.0
1157 / 84LEUYes————; occupancy ≥ 1.0
1158 / 85PROYes————; occupancy ≥ 1.0
1159 / 86ARGYes————; occupancy ≥ 1.0
1160 / 87THRYes————; occupancy ≥ 1.0
1161 / 88LYSYes————; occupancy ≥ 1.0
1162 / 89LEUYes————; occupancy ≥ 1.0
1163 / 90VALYes————; occupancy ≥ 1.0
1164 / 91PROYes————; occupancy ≥ 1.0
1165 / 92LEUYes————; occupancy ≥ 1.0
1166 / 93GLYYes————; occupancy ≥ 1.0
1167 / 94VALYes———A, B; occupancy ≥ 0.42
1168 / 95ASNYes————; occupancy ≥ 1.0

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