STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

2NLU · HDGF PWWP1

Source chain A, canonical annotation-core residues 12–69. SOLUTION NMR. Original-coordinate SHA-256: 41f0c735e8b5e268368908c73907e43f0ed5a6353833549a60a22f5af983a68d.

58Core residues with observed coordinates (58 annotated)
0Missing heavy side-chain atoms in observed core
16Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
15800000
25800000
35800000
45800000
55800000
65800000
75800000
85800000
95800000
105800000
115800000
125800000
135800000
145800000
155800000
165800000

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
12 / 12CYSYes————; occupancy ≥ 1.0
13 / 13GLYYes————; occupancy ≥ 1.0
14 / 14ASPYes————; occupancy ≥ 1.0
15 / 15LEUYes————; occupancy ≥ 1.0
16 / 16VALYes————; occupancy ≥ 1.0
17 / 17PHEYes————; occupancy ≥ 1.0
18 / 18ALAYes————; occupancy ≥ 1.0
19 / 19LYSYes————; occupancy ≥ 1.0
20 / 20METYes————; occupancy ≥ 1.0
21 / 21LYSYes————; occupancy ≥ 1.0
22 / 22GLYYes————; occupancy ≥ 1.0
23 / 23TYRYes————; occupancy ≥ 1.0
24 / 24PROYes————; occupancy ≥ 1.0
25 / 25HISYes————; occupancy ≥ 1.0
26 / 26TRPYes————; occupancy ≥ 1.0
27 / 27PROYes————; occupancy ≥ 1.0
28 / 28ALAYes————; occupancy ≥ 1.0
29 / 29ARGYes————; occupancy ≥ 1.0
30 / 30ILEYes————; occupancy ≥ 1.0
31 / 31ASPYes————; occupancy ≥ 1.0
32 / 32GLUYes————; occupancy ≥ 1.0
33 / 33METYes————; occupancy ≥ 1.0
34 / 34PROYes————; occupancy ≥ 1.0
35 / 35GLUYes————; occupancy ≥ 1.0
36 / 36ALAYes————; occupancy ≥ 1.0
37 / 37ALAYes————; occupancy ≥ 1.0
38 / 38VALYes————; occupancy ≥ 1.0
39 / 39LYSYes————; occupancy ≥ 1.0
40 / 40SERYes————; occupancy ≥ 1.0
41 / 41THRYes————; occupancy ≥ 1.0
42 / 42ALAYes————; occupancy ≥ 1.0
43 / 43ASNYes————; occupancy ≥ 1.0
44 / 44LYSYes————; occupancy ≥ 1.0
45 / 45TYRYes————; occupancy ≥ 1.0
46 / 46GLNYes————; occupancy ≥ 1.0
47 / 47VALYes————; occupancy ≥ 1.0
48 / 48PHEYes————; occupancy ≥ 1.0
49 / 49PHEYes————; occupancy ≥ 1.0
50 / 50PHEYes————; occupancy ≥ 1.0
51 / 51GLYYes————; occupancy ≥ 1.0
52 / 52THRYes————; occupancy ≥ 1.0
53 / 53HISYes————; occupancy ≥ 1.0
54 / 54GLUYes————; occupancy ≥ 1.0
55 / 55THRYes————; occupancy ≥ 1.0
56 / 56ALAYes————; occupancy ≥ 1.0
57 / 57PHEYes————; occupancy ≥ 1.0
58 / 58LEUYes————; occupancy ≥ 1.0
59 / 59GLYYes————; occupancy ≥ 1.0
60 / 60PROYes————; occupancy ≥ 1.0
61 / 61LYSYes————; occupancy ≥ 1.0
62 / 62ASPYes————; occupancy ≥ 1.0
63 / 63LEUYes————; occupancy ≥ 1.0
64 / 64PHEYes————; occupancy ≥ 1.0
65 / 65PROYes————; occupancy ≥ 1.0
66 / 66TYRYes————; occupancy ≥ 1.0
67 / 67GLUYes————; occupancy ≥ 1.0
68 / 68GLUYes————; occupancy ≥ 1.0
69 / 69SERYes————; occupancy ≥ 1.0

Export every residue · Export atom contacts · Export ensemble records · Scientific provenance.