Measured experimental coordinates · Phase 6C.1
2L89 · pdp1 PWWP1
Source chain A, canonical annotation-core residues 52–114. SOLUTION NMR. Original-coordinate SHA-256: cd55ce7839b4bb6373021b267f68997b927b20cf4f29a1e22fc789674ba01207.
Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry
Model-aware structural assessment
Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.
| Model | Core residues observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent conformer) | Partial occupancy residues | Unassessable chemistry |
|---|---|---|---|---|---|---|
| 1 | 63 | 0 | 0 | 0 | 0 | 0 |
| 2 | 63 | 0 | 0 | 0 | 0 | 0 |
| 3 | 63 | 0 | 0 | 0 | 0 | 0 |
| 4 | 63 | 0 | 0 | 0 | 0 | 0 |
| 5 | 63 | 0 | 0 | 0 | 0 | 0 |
| 6 | 63 | 0 | 0 | 0 | 0 | 0 |
| 7 | 63 | 0 | 0 | 0 | 0 | 0 |
| 8 | 63 | 0 | 0 | 0 | 0 | 0 |
| 9 | 63 | 0 | 0 | 0 | 0 | 0 |
| 10 | 63 | 0 | 0 | 0 | 0 | 0 |
| 11 | 63 | 0 | 0 | 0 | 0 | 0 |
| 12 | 63 | 0 | 0 | 0 | 0 | 0 |
| 13 | 63 | 0 | 0 | 0 | 0 | 0 |
| 14 | 63 | 0 | 0 | 0 | 0 | 0 |
| 15 | 63 | 0 | 0 | 0 | 0 | 0 |
| 16 | 63 | 0 | 0 | 0 | 0 | 0 |
| 17 | 63 | 0 | 0 | 0 | 0 | 0 |
| 18 | 63 | 0 | 0 | 0 | 0 | 0 |
| 19 | 63 | 0 | 0 | 0 | 0 | 0 |
| 20 | 63 | 0 | 0 | 0 | 0 | 0 |
Experimental ligand environments
Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.
No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.
Residue-level coordinate and atom completeness
"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.
| Canonical / entity position | Component | Observed | Missing backbone | Missing side-chain (union) | Missing side-chain (consistent) | Alt & occupancy |
|---|---|---|---|---|---|---|
| 52 / 8 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 53 / 9 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 54 / 10 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 55 / 11 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 56 / 12 | ILE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 57 / 13 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 58 / 14 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 59 / 15 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 60 / 16 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 61 / 17 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 62 / 18 | GLY | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 63 / 19 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 64 / 20 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 65 / 21 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 66 / 22 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 67 / 23 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 68 / 24 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 69 / 25 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 70 / 26 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 71 / 27 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 72 / 28 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 73 / 29 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 74 / 30 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 75 / 31 | GLU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 76 / 32 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 77 / 33 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 78 / 34 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 79 / 35 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 80 / 36 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 81 / 37 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 82 / 38 | THR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 83 / 39 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 84 / 40 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 85 / 41 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 86 / 42 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 87 / 43 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 88 / 44 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 89 / 45 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 90 / 46 | TYR | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 91 / 47 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 92 / 48 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 93 / 49 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 94 / 50 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 95 / 51 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 96 / 52 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 97 / 53 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 98 / 54 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 99 / 55 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 100 / 56 | PHE | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 101 / 57 | ALA | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 102 / 58 | TRP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 103 / 59 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 104 / 60 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 105 / 61 | ARG | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 106 / 62 | ASN | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 107 / 63 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 108 / 64 | VAL | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 109 / 65 | LYS | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 110 / 66 | PRO | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 111 / 67 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 112 / 68 | LEU | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 113 / 69 | ASP | Yes | — | — | — | —; occupancy ≥ 1.0 |
| 114 / 70 | SER | Yes | — | — | — | —; occupancy ≥ 1.0 |
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