STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Measured experimental coordinates · Phase 6C.1

11NZ · DNMT3A PWWP1

Source chain A, canonical annotation-core residues 292–350. ELECTRON MICROSCOPY · reported 4.19 Å. Original-coordinate SHA-256: 356d7dbef2150e7da14f3292657b228a2292bb71119da5f141ce901b45aad8e3.

0Core residues with observed coordinates (59 annotated)
0Missing heavy side-chain atoms in observed core
1Experimental models evaluated
0Source-supported ligand environments

Open deposited-coordinate molecular viewer Protein/domain context Original PDB entry

Model-aware structural assessment

Counts concern the annotated PWWP core. Different NMR models are evaluated independently, without averaging their coordinates into an artificial model.

ModelCore residues observedMissing backboneMissing side-chain (union)Missing side-chain (consistent conformer)Partial occupancy residuesUnassessable chemistry
1000000

Experimental ligand environments

Only separately source-classified research ligands are listed. Native annotation-core contacts and broader Pfam-fold contacts are identified separately. A simple distance is not an experimental affinity or density-quality score.

No verified research-ligand local environment is assigned to this chain/domain. It may be apo, structurally incomplete, or lack the necessary source-role verification.

Residue-level coordinate and atom completeness

"Missing" applies only to residues with observed atoms and supported chemical templates. Unobserved residues are reported separately. Alternate-conformer union presence is distinct from a single internally consistent conformer.

Canonical / entity positionComponentObservedMissing backboneMissing side-chain (union)Missing side-chain (consistent)Alt & occupancy
292 / 13ILENo coordinates————
293 / 14GLYNo coordinates————
294 / 15GLUNo coordinates————
295 / 16LEUNo coordinates————
296 / 17VALNo coordinates————
297 / 18TRPNo coordinates————
298 / 19GLYNo coordinates————
299 / 20LYSNo coordinates————
300 / 21LEUNo coordinates————
301 / 22ARGNo coordinates————
302 / 23GLYNo coordinates————
303 / 24PHENo coordinates————
304 / 25SERNo coordinates————
305 / 26TRPNo coordinates————
306 / 27TRPNo coordinates————
307 / 28PRONo coordinates————
308 / 29GLYNo coordinates————
309 / 30ARGNo coordinates————
310 / 31ILENo coordinates————
311 / 32VALNo coordinates————
312 / 33SERNo coordinates————
313 / 34TRPNo coordinates————
314 / 35TRPNo coordinates————
315 / 36METNo coordinates————
316 / 37THRNo coordinates————
317 / 38GLYNo coordinates————
318 / 39ARGNo coordinates————
319 / 40SERNo coordinates————
320 / 41ARGNo coordinates————
321 / 42ALANo coordinates————
322 / 43ALANo coordinates————
323 / 44GLUNo coordinates————
324 / 45GLYNo coordinates————
325 / 46THRNo coordinates————
326 / 47ARGNo coordinates————
327 / 48TRPNo coordinates————
328 / 49VALNo coordinates————
329 / 50METNo coordinates————
330 / 51TRPNo coordinates————
331 / 52PHENo coordinates————
332 / 53GLYNo coordinates————
333 / 54ASPNo coordinates————
334 / 55GLYNo coordinates————
335 / 56LYSNo coordinates————
336 / 57PHENo coordinates————
337 / 58SERNo coordinates————
338 / 59VALNo coordinates————
339 / 60VALNo coordinates————
340 / 61CYSNo coordinates————
341 / 62VALNo coordinates————
342 / 63GLUNo coordinates————
343 / 64LYSNo coordinates————
344 / 65LEUNo coordinates————
345 / 66METNo coordinates————
346 / 67PRONo coordinates————
347 / 68LEUNo coordinates————
348 / 69SERNo coordinates————
349 / 70SERNo coordinates————
350 / 71PHENo coordinates————

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