Resolved chemical identity

N-{[(4R)-5,6,7,8-tetrahydro[1,2,4]triazolo[4,3-a]pyridin-3-yl]methyl}propanamide

Deposited research ligand · no curated assay

complete_deposited_InChIKey

0 assay / association records0 preparations1 research-ligand PDB entries

Clinical / development status: Not independently curated. A chemical probe classification does not imply medicinal approval.

Identity is separate from preparation

Chemical identity

Stable identity: INCHIKEY:IOOTXFHTMOUUHM-UHFFFAOYSA-N
Full InChIKey: IOOTXFHTMOUUHM-UHFFFAOYSA-N
Source identity status: complete deposited InChIKey
Deposited CCD identifiers: A1AM1
External identifiers: See deposited identity and source links

Reference formula: C10H16N4O
Calculated molecular weight: 208.265
Calculated descriptors: cLogP 0.6406 · TPSA 59.81 Å² · HBD 1 · HBA 4RDKit 2025.09.3; calculations for this source identity, not experimental measurements.
Depiction validation: verified smiles full inchikey match

SMILES, InChI & complete identity record

Isomeric SMILES: CCC(=O)NCc1nnc2n1CCCC2
InChI: Not curated

{
  "aliases": [
    "N-{[(4R)-5,6,7,8-tetrahydro[1,2,4]triazolo[4,3-a]pyridin-3-yl]methyl}propanamide"
  ],
  "ccd_ids": [
    "A1AM1"
  ],
  "ccd_names": "[\"N-{[(4R)-5,6,7,8-tetrahydro[1,2,4]triazolo[4,3-a]pyridin-3-yl]methyl}propanamide\"]",
  "ccd_types": "[\"non-polymer\"]",
  "chemical_id": "INCHIKEY:IOOTXFHTMOUUHM-UHFFFAOYSA-N",
  "connectivity_block": "IOOTXFHTMOUUHM",
  "curated_source_sha256": null,
  "curation_version": "frozen-v1.2",
  "external_identifiers": {},
  "formal_charge_by_ccd": "{\"A1AM1\": 0}",
  "formulae": "[\"C10 H16 N4 O\"]",
  "geometry_note": "CCD ideal SDF is a reference chemical geometry, not a deposited bound pose.",
  "identity_status": "complete_deposited_InChIKey",
  "inchikey": "IOOTXFHTMOUUHM-UHFFFAOYSA-N",
  "inventory_origin": "v1_CCD_inventory",
  "isomeric_smiles": "CCC(=O)NCc1nnc2n1CCCC2",
  "primary_name": "N-{[(4R)-5,6,7,8-tetrahydro[1,2,4]triazolo[4,3-a]pyridin-3-yl]methyl}propanamide",
  "retrieval_date": "2026-10-24",
  "smiles_stereo_by_ccd": "{\"A1AM1\": \"CCC(=O)NCc1nnc2n1CCCC2\"}",
  "source_metadata_sha256": "{\"A1AM1\": \"a1ce41054351468fe1c25d04fe7ea35a3d209dd13c032d0df090f2bf80c59047\"}",
  "source_urls": [
    "https://www.rcsb.org/ligand/A1AM1"
  ]
}

Measured target and original context

Bioactivity & experimental observations

Download assay CSV

Each row is one source-specific observation. Repeated measurements of this compound are not independent compounds. Direct binding, functional displacement and cellular outcomes retain their distinct endpoints.

Preparation	Tested target & construct	Method / endpoint	Original observation	Conditions & uncertainty	Source & verification
No observations match these filters. Missing curation is not evidence of biological inactivity.

Exact deposited instances

Experimental structures

Native-core and broader Pfam proximity are distinguished from contacts elsewhere in a protein. Each action opens the actual deposited ligand instance. Geometric proximity does not supply a measured binding affinity.

Entry / ligand	Native domain & protein chain	Geometric evidence	Minimum distance	Inspect
7HGM · A1AM1PDB:7HGM:LIG:G:A1AM1:104:.	HDGFL2 PWWP1Protein label chain A · ligand label chain G	native annotation core contactexperimentally deposited fragmentscreened fragment structure · research ligand. Deposited geometry is not solution affinity.	Core: 2.5501 Å Pfam: 2.5501 Å	View deposited instance
7HGM · A1AM1PDB:7HGM:LIG:K:A1AM1:103:.	HDGFL2 PWWP1Protein label chain A · ligand label chain K	native annotation core contactexperimentally deposited fragmentscreened fragment structure · research ligand. Deposited geometry is not solution affinity.	Core: 3.5539 Å Pfam: 3.5539 Å	View deposited instance
7HGM · A1AM1PDB:7HGM:LIG:K:A1AM1:103:.	HDGFL2 PWWP1Protein label chain B · ligand label chain K	native annotation core contactexperimentally deposited fragmentscreened fragment structure · research ligand. Deposited geometry is not solution affinity.	Core: 2.6457 Å Pfam: 2.6457 Å	View deposited instance
7HGM · A1AM1PDB:7HGM:LIG:M:A1AM1:102:.	HDGFL2 PWWP1Protein label chain C · ligand label chain M	native annotation core contactexperimentally deposited fragmentscreened fragment structure · research ligand. Deposited geometry is not solution affinity.	Core: 2.7617 Å Pfam: 2.7617 Å	View deposited instance

Preparations, identities and controls remain separate

Experimental context

No measured preparation is linked to this deposited identity in the curated snapshot.

Provenance and reproducibility

Sources & downloads

https://www.rcsb.org/ligand/A1AM1

Download complete evidence JSON Curation methods & source receipts

Snapshot 2026-10-26 · phase5-1.0.0 · original measurements, operators, constructs and uncertainty are retained in the exports.