STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

9GRS · A1H6Y

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain G · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
12Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:9GRS:LIG:G:A1H6Y:101:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
ea6962be06f3f0d1f1eafd6f9dc63f52f2ac283158251f34bbd80282a812975c
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
11 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
48THR471452.657 ÅOG1 · O2
50GLU491523.279 ÅOE1 · C6
45PHE441423.343 ÅCB · O2
22TRP21483.678 ÅCE3 · C1
16MET15323.694 ÅSD · C4
19TYR18453.735 ÅCD1 · C1
51THR501534.075 ÅO · BR1
52ALA511544.351 ÅCB · C4
76LYSUnmappedUnqualified5.112 ÅO · O1
46PHE451435.148 ÅO · O2
20PRO19465.486 ÅO · C1
49HIS481465.673 ÅN · O2

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays