STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

9FOC · A1IEG

UP:O96028:PWWP1 · protein label chain A · ligand label chain D · model 1

Original structure and viewer
14Protein-chain contacts within 5 Å
17Protein-chain contacts within 6 Å
6Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:9FOC:LIG:D:A1IEG:402:.:SITE:UP:O96028:PWWP1:A
Original mmCIF SHA-256
8ae5d68a73d09d1007d3171e7649074a9b67184d587435cc50eba2241f68c269
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
13 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
69GLU2721522.904 ÅOE1 · N
67ALA2701463.036 ÅN · O1
66ASP2691453.074 ÅN · O2
30TYR233453.367 ÅOH · N3
65GLY2681443.456 ÅCA · O2
118GLNUnmappedUnqualified3.465 ÅCB · O2
33TRP236483.466 ÅCZ2 · C13
63PHE2661423.612 ÅCD2 · C11
64PHE2671433.789 ÅO · O2
68PROUnmappedUnqualified3.901 ÅO · C
71ALA2741544.049 ÅCB · C8
27VAL230324.199 ÅCG1 · C8
70ARG2731534.286 ÅO · C8
115LEUUnmappedUnqualified4.538 ÅCD1 · C12
119TRPUnmappedUnqualified5.061 ÅN · O2
31PRO234465.506 ÅO · C11
73ILE2761565.918 ÅCD1 · C8

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
115LEU—single / commonNoneNone
118GLN—single / commonNoneNone
30TYR233single / commonNoneNone
33TRP236single / commonNoneNone
63PHE266single / commonNoneNone
67ALA270single / commonNoneNone
68PRO—single / commonNoneNone
69GLU272single / commonNoneNone
70ARG273single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays