STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

9EXX · A1H7Y

UP:O96028:PWWP1 · protein label chain B · ligand label chain E · model 1

Original structure and viewer
3Protein-chain contacts within 5 Å
4Protein-chain contacts within 6 Å
0Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:9EXX:LIG:E:A1H7Y:403:.:SITE:UP:O96028:PWWP1:B
Original mmCIF SHA-256
4ef651cb3bade2458fffbd850521dfbd402b610696c1497284792c0f1355d126
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
Insufficient for direct fingerprint comparison
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

Original coordinate file has not been loaded into this browser.

Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
117ALAUnmappedUnqualified3.391 ÅCB · C2
113GLYUnmappedUnqualified3.628 ÅCA · C20
114LYSUnmappedUnqualified3.636 ÅCD · O2
112SERUnmappedUnqualified5.837 ÅC · C21

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
113GLY—single / commonNoneNone
114LYS—single / commonNoneNone
117ALA—single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays