STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HHK · LPU

UP:Q7Z4V5:PWWP1 · protein label chain A · ligand label chain G · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
13Protein-chain contacts within 6 Å
8Qualified local alignment positions
1Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HHK:LIG:G:LPU:104:.:SITE:UP:Q7Z4V5:PWWP1:A
Original mmCIF SHA-256
1a3c7b8e5d015f78992c468b0a82329764e92610b40da0f8fca9467f05dcd6a1
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
12 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
48THR471452.893 ÅOG1 · O1
50GLU491522.909 ÅOE1 · C3
22TRP21483.299 ÅCE3 · C1
45PHE441423.507 ÅCD1 · C2
19TYR18453.509 ÅCE1 · O2
16MET15323.921 ÅSD · C4
52ALA511544.347 ÅCB · O3
51THR501534.548 ÅO · C3
20PRO19465.149 ÅO · C1
76LYSUnmappedUnqualified5.356 ÅO · O2
46PHE451435.372 ÅO · O1
14ALA13305.729 ÅO · C1
49HIS481465.838 ÅN · O1

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneCD1
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays