STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HHD · A1A3V

UP:Q7Z4V5:PWWP1 · protein label chain A · ligand label chain J · model 1

Original structure and viewer
3Protein-chain contacts within 5 Å
4Protein-chain contacts within 6 Å
3Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HHD:LIG:J:A1A3V:103:.:SITE:UP:Q7Z4V5:PWWP1:A
Original mmCIF SHA-256
96a76c3d4db63c21ddd5c258bbb56fa9b78d8b1461055348ae449330c5ab0453
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
3 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

Original coordinate file has not been loaded into this browser.

Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
31ASP30573.256 ÅO · C2
32GLY31583.851 ÅCA · C8
30ALA29564.062 ÅCB · C
33ALAUnmappedUnqualified5.932 ÅN · C8

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
30ALA29single / commonNoneNone
31ASP30single / commonNoneNone
32GLY31single / commonNoneNone
33ALA—single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays