STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HH4 · A1A39

UP:Q7Z4V5:PWWP1 · protein label chain A · ligand label chain G · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
9Protein-chain contacts within 6 Å
7Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HH4:LIG:G:A1A39:104:.:SITE:UP:Q7Z4V5:PWWP1:A
Original mmCIF SHA-256
510e664fc490fc6f401324f1ab8850f0e0dcd84c18bb674bd7a5d054beea887a
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
8 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

Original coordinate file has not been loaded into this browser.

Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
50GLU491522.112 ÅOE1 · C5
51THR501532.754 ÅO · C8
16MET15323.033 ÅCE · C3
19TYR18453.105 ÅCE1 · N
45PHE441423.361 ÅCE1 · C4
52ALA511543.603 ÅCB · C7
22TRP21483.725 ÅCE2 · C
48THR471453.726 ÅCG2 · C
76LYSUnmappedUnqualified5.580 ÅO · C

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays