STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HH0 · RYP

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain J · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
10Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HH0:LIG:J:RYP:103:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
0c18dba4b9a8f66eff6ddcb52e8b131a65291eb9b3438c1530299b3d273ee994
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
10 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

Original coordinate file has not been loaded into this browser.

Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
50GLU491523.399 ÅOE2 · C08
16MET15323.427 ÅCE · C06
51THR501533.641 ÅO · C08
45PHE441423.705 ÅCE2 · C01
19TYR18453.740 ÅCE2 · C05
22TRP21483.784 ÅCE3 · C01
52ALA511544.316 ÅCB · C08
48THR471454.792 ÅOG1 · N02
20PRO19465.049 ÅO · C01
14ALA13305.248 ÅO · C01

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays