STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HGY · UVA

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain H · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
12Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HGY:LIG:H:UVA:105:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
4f22c6399b6aef7275aadbd7ee34711a4b5f37e5385d18ace1a3bff390a1b6cc
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
11 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

Original coordinate file has not been loaded into this browser.

Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
48THR471452.691 ÅOG1 · O
45PHE441423.397 ÅCB · O
50GLU491523.472 ÅCB · C5
19TYR18453.601 ÅCD1 · C7
22TRP21483.725 ÅCE3 · C7
51THR501533.864 ÅO · C4
16MET15323.922 ÅCE · C4
52ALA511544.297 ÅCB · C4
76LYSUnmappedUnqualified5.061 ÅO · O1
46PHE451435.346 ÅO · O
49HIS481465.647 ÅN · O
20PRO19465.800 ÅO · C7

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays