STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HGO · 8DH

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain J · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
13Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HGO:LIG:J:8DH:103:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
59502200c946ad49417ae7474a0e2d74d11e2d7b2579181e1e871b1a6d1bb0a6
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
12 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
51THR501532.685 ÅO · N12
48THR471452.722 ÅOG1 · O07
22TRP21483.498 ÅCZ3 · C01
52ALA511543.513 ÅCB · C11
45PHE441423.534 ÅCE1 · C11
19TYR18453.587 ÅCE2 · C05
50GLU491523.691 ÅCB · O07
16MET15323.802 ÅCG · C03
20PRO19465.160 ÅO · C03
14ALA13305.339 ÅO · C03
76LYSUnmappedUnqualified5.399 ÅO · C01
49HIS481465.640 ÅN · O07
43ILE421405.858 ÅO · C11

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays