STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HGM · A1AM1

UP:Q7Z4V5:PWWP1 · protein label chain A · ligand label chain G · model 1

Original structure and viewer
9Protein-chain contacts within 5 Å
12Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HGM:LIG:G:A1AM1:104:.:SITE:UP:Q7Z4V5:PWWP1:A
Original mmCIF SHA-256
f021515fcc93f71d32c3e0682b0e0209a12607a2e970402ef64c3f2287eb8b4f
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
11 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
19TYR18452.550 ÅOH · C3
50GLU491522.686 ÅOE1 · N
48THR471453.082 ÅCG2 · N2
45PHE441423.440 ÅCD2 · C7
22TRP21483.664 ÅCE2 · C6
52ALA511543.844 ÅCB · C
16MET15324.042 ÅSD · C8
51THR501534.191 ÅO · C
76LYSUnmappedUnqualified4.719 ÅO · N2
46PHE451435.704 ÅO · C6
20PRO19465.864 ÅO · C7
14ALA13305.969 ÅO · C7

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays