STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HGE · X0S

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain J · model 1

Original structure and viewer
9Protein-chain contacts within 5 Å
13Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HGE:LIG:J:X0S:103:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
a47e6ecaec82ebbe6f11d34a6daf2212907a2bb073f6e809384d95bfeaae54e6
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
12 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
48THR471452.631 ÅOG1 · O1
19TYR18453.181 ÅOH · C3
45PHE441423.301 ÅCE1 · CL1
50GLU491523.338 ÅCG · O1
16MET15323.607 ÅCE · C1
22TRP21483.729 ÅCE3 · C7
52ALA511544.643 ÅCB · CL1
51THR501534.899 ÅO · CL1
76LYSUnmappedUnqualified4.986 ÅO · O2
20PRO19465.296 ÅO · C7
49HIS481465.431 ÅN · O1
14ALA13305.792 ÅO · C7
46PHE451435.861 ÅO · O1

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone
52ALA51single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays