STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

7HG3 · ZQD

UP:Q7Z4V5:PWWP1 · protein label chain B · ligand label chain H · model 1

Original structure and viewer
8Protein-chain contacts within 5 Å
12Protein-chain contacts within 6 Å
7Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:7HG3:LIG:H:ZQD:105:.:SITE:UP:Q7Z4V5:PWWP1:B
Original mmCIF SHA-256
6fb01f1cd1cc044a843d5160722d99170c3564d03ed377b699c0fd96a9562ed2
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_multi_chain_possible
Fingerprint
11 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
48THR471452.684 ÅOG1 · O13
19TYR18453.415 ÅOH · C03
45PHE441423.437 ÅCB · O13
22TRP21483.586 ÅCE3 · C15
50GLU491523.602 ÅOE1 · O06
16MET15323.703 ÅSD · C09
52ALA511544.483 ÅCB · C09
51THR501534.687 ÅO · C09
76LYSUnmappedUnqualified5.405 ÅO · O14
46PHE451435.475 ÅO · O13
49HIS481465.638 ÅN · O13
20PRO19465.704 ÅO · C15

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
16MET15single / commonNoneNone
19TYR18single / commonNoneNone
22TRP21single / commonNoneNone
45PHE44single / commonNoneNone
48THR47single / commonNoneNone
50GLU49single / commonNoneNone
51THR50single / commonNoneNone

Compare experimental site geometry

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays