STRUCTURAL BIOLOGY & CHEMICAL EVIDENCEDataset v1.2 · Phase 6D · Comparative experimental recognition environments

Exact experimental source · Phase 6D

4Z02 · 4K8

UP:O95696:PWWP1 · protein label chain B · ligand label chain L · model 1

Original structure and viewer
7Protein-chain contacts within 5 Å
10Protein-chain contacts within 6 Å
8Qualified local alignment positions
0Side-chain incomplete residues in local neighborhood

Identity and provenance

Source evidence
phase6a:site_classification:PDB:4Z02:LIG:L:4K8:1101:.:SITE:UP:O95696:PWWP1:B
Original mmCIF SHA-256
4845453d35b02dbb549d6634f82d209e4ec7a4b1c71ec02c869eea9e8bf3c2b9
Experimental method
'X-RAY DIFFRACTION'
Source site class
deposited_research_ligand · source_observed
Assembly context
asymmetric_unit_only
Fingerprint
10 qualified aligned contact positions
View original Phase 6C.1 ligand environment

Original experimental coordinates

Load the exact deposited source bytes; the browser verifies the original SHA-256 before drawing. Contacting protein residues and the specified ligand are highlighted only where the local parser can uniquely match source chain and residue identifiers. Otherwise the unmodified deposited structure remains available without an invented interaction highlight.

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Measured residue contacts

The table shows deposited protein-chain residue geometry, including native sequence identifiers. The listed contact atoms are selected under explicit alternate-conformer policy.

Label residueResidueCanonical positionMSA columnMin. heavy-atom distanceContact atoms
75GLN9991542.913 ÅNE2 · O03
73SER9971523.338 ÅOG · C12
69ASP9931443.621 ÅOD2 · C10
19TYR943483.635 ÅCD2 · C09
67PHE9911423.744 ÅCZ · C07
16TYR940454.085 ÅCE2 · C05
13CYS937324.228 ÅSG · C05
17PRO941465.028 ÅO · C08
74TRP9981535.232 ÅO · C02
11ALA935305.583 ÅO · C08

Local atomic completeness

Label residueTypeCanonicalObserved conformerMissing backboneMissing side chain
13CYS937single / commonNoneNone
16TYR940single / commonNoneNone
19TYR943single / commonNoneNone
67PHE991single / commonNoneNone
69ASP993single / commonNoneNone
73SER997single / commonNoneNone
74TRP998single / commonNoneNone
75GLN999single / commonNoneNone

Compare experimental site geometry

For nonredundant comparison this deposited instance uses source-qualified within-entry representative PDB:4Z02:LIG:C:4K8:1101:.:SITE:UP:O95696:PWWP1:A. Both original records remain separately accessible.

Further comparisons

All research-ligand observations for this domain · Original structural quality · Chemical classifications and assays