{ "version": { "version": "phase5-1.0.0", "date": "2026-10-26", "frozen_database_sha256": "0c53107a39e222b48611302b21fda5fb4ed50b190b6b39d41423ccc5ca5958f6", "chemical_identities": 148, "profiles": 163, "relevant_profiles": 132, "preparations": 30, "observations": 80, "frozen_observations": 46, "new_observations": 34, "bioactivity_only_profiles": 21, "exact_PWWP_structural_profiles": 130, "verified_depictions": 139, "reconciled_duplicate_rows": 0, "candidate_records": 150, "curated_scope": "Documented targeted snapshot; not an exhaustive inventory of all literature compounds. Coordinate proximity and assay measurements are independent evidence dimensions." }, "filters": { "q": "", "protein": "", "domain": "UP:P55201:PWWP1", "bound": "", "pdb": "", "identity": "", "role": "", "method": "", "endpoint": "", "relation": "", "potency_min": "", "potency_max": "", "source": "", "year": "", "organism": "", "construct": "", "status": "", "missing": "", "scope": "relevant", "view": "unresolved", "sort": "" }, "compounds": [ { "aliases": [ "N-TRIMETHYLLYSINE" ], "assay_count": 0, "associated_pdb_ids": [ "2X4W", "2X4X", "2X4Y", "3MO8", "3QBY", "3QJ6", "4N4H", "4N4I", "5CIU", "6IIS" ], "bound_structure_count": 10, "category": "Structure-supported identity", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "classifications": [], "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "curation_version": "phase5-1.0.0", "depiction": { "calculated_HBA": 2, "calculated_HBD": 2, "calculated_TPSA": 63.32, "calculated_formula": "C9H21N2O2+", "calculated_logP": 0.2748, "calculated_molecular_weight": 189.279, "computed_inchikey": "MXNRLFUSFKVQSK-QMMMGPOBSA-O", "descriptor_scope": "RDKit calculation for the source identity; not an experimental measurement", "files": { "dark": "aa657b4e2dd68a2c7900-dark.svg", "light": "aa657b4e2dd68a2c7900-light.svg" }, "rdkit_version": "2025.09.3", "status": "verified_smiles_full_inchikey_match" }, "development_status": "Not independently curated", "domain_ids": [ "UP:P55201:PWWP1", "UP:Q7Z4V5:PWWP1", "UP:Q8R5C8:PWWP1", "UP:Q9UBC3:PWWP1", "UP:Q9Y3E1:PWWP1" ], "entity_kind": "chemical_identity", "genes": [ "BRPF1", "DNMT3B", "HDGFL2", "HDGFL3", "Zmynd11" ], "has_bioactivity_only": false, "has_source_conflict": false, "identity": { "aliases": [ "N-TRIMETHYLLYSINE" ], "ccd_ids": [ "M3L" ], "ccd_names": "[\"N-TRIMETHYLLYSINE\"]", "ccd_types": "[\"L-PEPTIDE LINKING\"]", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "connectivity_block": "MXNRLFUSFKVQSK", "curated_source_sha256": "f0456a25e0e7b3c5f8f4d59bbb3e48be6247a7a297fee9107530aa68e41b9b88", "curation_version": "frozen-v1.2", "external_identifiers": {}, "formal_charge_by_ccd": "{\"M3L\": 1}", "formulae": "[\"C9 H21 N2 O2\"]", "geometry_note": "Chemical identity of one peptide-linking residue; not the entire peptide. Ideal CCD geometry is not a bound pose.", "identity_status": "complete_deposited_InChIKey", "inchikey": "MXNRLFUSFKVQSK-QMMMGPOBSA-O", "inventory_origin": "v1_1_supplemental_polymer_monomer", "isomeric_smiles": "C[N+](C)(C)CCCC[C@@H](C(=O)O)N", "primary_name": "N-TRIMETHYLLYSINE", "retrieval_date": "2026-10-24", "smiles_stereo_by_ccd": "{\"M3L\": \"C[N+](C)(C)CCCC[C@@H](C(=O)O)N\"}", "source_metadata_sha256": "{}", "source_urls": [ "https://www.rcsb.org/ligand/M3L" ] }, "identity_note": "complete_deposited_InChIKey", "identity_resolved": true, "is_control": false, "is_probe": false, "measured_observation_count": 0, "name": "N-TRIMETHYLLYSINE", "negative_count": 0, "observation_ids": [], "pdb_structure_count": 10, "preparation_count": 0, "preparation_ids": [], "protein_ids": [ "UP:P55201", "UP:Q7Z4V5", "UP:Q8R5C8", "UP:Q9UBC3", "UP:Q9Y3E1" ], "relationships": [], "relevant": false, "search_text": "n-trimethyllysine inchikey:mxnrlfusfkvqsk-qmmmgpobsa-o n-trimethyllysine brpf1 dnmt3b hdgfl2 hdgfl3 zmynd11 up:p55201:pwwp1 up:q7z4v5:pwwp1 up:q8r5c8:pwwp1 up:q9ubc3:pwwp1 up:q9y3e1:pwwp1 2x4w 2x4x 2x4y 3mo8 3qby 3qj6 4n4h 4n4i 5ciu 6iis {\"aliases\":[\"n-trimethyllysine\"],\"ccd_ids\":[\"m3l\"],\"ccd_names\":\"[\\\"n-trimethyllysine\\\"]\",\"ccd_types\":\"[\\\"l-peptide linking\\\"]\",\"chemical_id\":\"inchikey:mxnrlfusfkvqsk-qmmmgpobsa-o\",\"connectivity_block\":\"mxnrlfusfkvqsk\",\"curated_source_sha256\":\"f0456a25e0e7b3c5f8f4d59bbb3e48be6247a7a297fee9107530aa68e41b9b88\",\"curation_version\":\"frozen-v1.2\",\"external_identifiers\":{},\"formal_charge_by_ccd\":\"{\\\"m3l\\\": 1}\",\"formulae\":\"[\\\"c9 h21 n2 o2\\\"]\",\"geometry_note\":\"chemical identity of one peptide-linking residue; not the entire peptide. ideal ccd geometry is not a bound pose.\",\"identity_status\":\"complete_deposited_inchikey\",\"inchikey\":\"mxnrlfusfkvqsk-qmmmgpobsa-o\",\"inventory_origin\":\"v1_1_supplemental_polymer_monomer\",\"isomeric_smiles\":\"c[n+](c)(c)cccc[c@@h](c(=o)o)n\",\"primary_name\":\"n-trimethyllysine\",\"retrieval_date\":\"2026-10-24\",\"smiles_stereo_by_ccd\":\"{\\\"m3l\\\": \\\"c[n+](c)(c)cccc[c@@h](c(=o)o)n\\\"}\",\"source_metadata_sha256\":\"{}\",\"source_urls\":[\"https://www.rcsb.org/ligand/m3l\"]}", "source_urls": [ "https://www.rcsb.org/ligand/M3L" ], "verification_pending": false, "context_observations": [], "context_structures": [ { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.6336, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.642, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7483, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5846, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.489, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.3655, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8067, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8857, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.6336, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.642, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7483, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5846, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.489, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.3655, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8067, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8857, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4W:CHAIN:A:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.6336, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.642, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7483, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5846, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.489, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.3655, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8067, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8857, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4W:CONN:covale1\", \"PDB:2X4W:CONN:covale2\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"B\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"A\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"B\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4W:CONN:covale1\", \"PDB:2X4W:CONN:covale2\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "B", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4W:LIG:B:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3275, "nearest_polypeptide_label_asym_id": "B", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4W", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.6336, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.642, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7483, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5846, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.489, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.3655, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8067, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8857, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.426, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3275, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3326, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 4.5577, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4W/original.cif", "source_coordinate_sha256": "abae03e17ec0f4543683c8be73cb4157fc69c0b3ab21a2d1f83fabbe6fec1783", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4W:LIG:B:M3L:36:15", "ligand_label_asym_id": "B", "minimum_Pfam_distance_angstrom": 2.8067, "minimum_chain_distance_angstrom": 2.8067, "minimum_core_distance_angstrom": 2.8067, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4W", "protein_id": "UP:P55201", "protein_label_asym_id": "A", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4W:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_coordinate_sha256": "abae03e17ec0f4543683c8be73cb4157fc69c0b3ab21a2d1f83fabbe6fec1783" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.7008, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7036, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4707, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5823, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7762, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4403, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8831, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6991, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.7008, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7036, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4707, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5823, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7762, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4403, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8831, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6991, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4X:CHAIN:A:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.7008, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7036, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4707, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5823, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7762, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4403, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8831, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6991, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale1\", \"PDB:2X4X:CONN:covale2\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"B\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"A\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"B\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale1\", \"PDB:2X4X:CONN:covale2\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "B", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4X:LIG:B:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3304, "nearest_polypeptide_label_asym_id": "B", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4X", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.7008, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7036, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4707, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5823, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7762, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4403, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8831, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6991, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.5429, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3316, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3304, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.7654, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4X/original.cif", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4X:LIG:B:M3L:36:15", "ligand_label_asym_id": "B", "minimum_Pfam_distance_angstrom": 2.8831, "minimum_chain_distance_angstrom": 2.8831, "minimum_core_distance_angstrom": 2.8831, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4X", "protein_id": "UP:P55201", "protein_label_asym_id": "A", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4X:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.7572, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6474, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6899, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.54, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.2449, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9242, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6483, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.7572, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6474, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6899, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.54, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.2449, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9242, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6483, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4X:CHAIN:C:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.7572, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6474, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6899, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.54, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.2449, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9242, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6483, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale3\", \"PDB:2X4X:CONN:covale4\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"D\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"C\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"D\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale3\", \"PDB:2X4X:CONN:covale4\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "D", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4X:LIG:D:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3266, "nearest_polypeptide_label_asym_id": "D", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4X", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.7572, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6474, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6899, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.54, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.2449, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9242, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6483, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 3.3905, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 1.3304, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 1.3266, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 3.5991, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4X/original.cif", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4X:LIG:D:M3L:36:15", "ligand_label_asym_id": "D", "minimum_Pfam_distance_angstrom": 2.9242, "minimum_chain_distance_angstrom": 2.9242, "minimum_core_distance_angstrom": 2.9242, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4X", "protein_id": "UP:P55201", "protein_label_asym_id": "C", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4X:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8259, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6605, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8026, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7526, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4201, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.3687, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.917, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.0597, \"uniprot_position\": 1155}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.4736, \"uniprot_position\": 1184}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8259, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6605, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8026, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7526, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4201, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.3687, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.917, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.0597, \"uniprot_position\": 1155}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.4736, \"uniprot_position\": 1184}]", "chain_id": "PDB:2X4X:CHAIN:E:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8259, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6605, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8026, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7526, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4201, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.3687, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.917, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.0597, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale5\", \"PDB:2X4X:CONN:covale6\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"F\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"E\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"F\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale5\", \"PDB:2X4X:CONN:covale6\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "F", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4X:LIG:F:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3265, "nearest_polypeptide_label_asym_id": "F", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4X", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8259, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6605, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.8026, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7526, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4201, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.3687, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.917, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.0597, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.4736, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 3.5671, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 1.3265, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 1.3274, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 4.4944, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4X/original.cif", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4X:LIG:F:M3L:36:15", "ligand_label_asym_id": "F", "minimum_Pfam_distance_angstrom": 2.917, "minimum_chain_distance_angstrom": 2.917, "minimum_core_distance_angstrom": 2.917, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4X", "protein_id": "UP:P55201", "protein_label_asym_id": "E", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4X:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.7592, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.595, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7706, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7478, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5975, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3588, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.9307, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.367, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.7592, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.595, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7706, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7478, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5975, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3588, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.9307, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.367, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4X:CHAIN:G:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.7592, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.595, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7706, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7478, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5975, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3588, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.9307, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.367, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale7\", \"PDB:2X4X:CONN:covale8\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"H\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"G\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"H\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4X:CONN:covale7\", \"PDB:2X4X:CONN:covale8\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "H", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4X:LIG:H:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3249, "nearest_polypeptide_label_asym_id": "H", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4X", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.7592, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.595, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7706, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7478, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5975, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3588, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.9307, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.367, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 3.4633, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 1.3289, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 1.3249, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 3.8244, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4X/original.cif", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4X:LIG:H:M3L:36:15", "ligand_label_asym_id": "H", "minimum_Pfam_distance_angstrom": 2.9307, "minimum_chain_distance_angstrom": 2.9307, "minimum_core_distance_angstrom": 2.9307, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4X", "protein_id": "UP:P55201", "protein_label_asym_id": "G", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4X:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "source_coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.2337, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.461, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.891, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7887, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7063, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5064, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4202, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.7421, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.1692, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.2337, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.461, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.891, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7887, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7063, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5064, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4202, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.7421, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.1692, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:A:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.2337, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.461, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.891, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7887, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7063, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5064, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4202, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.7421, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.1692, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale1\", \"PDB:2X4Y:CONN:covale2\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"B\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"A\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"B\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale1\", \"PDB:2X4Y:CONN:covale2\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "B", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:B:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3259, "nearest_polypeptide_label_asym_id": "B", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.2337, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.461, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.891, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7887, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7063, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5064, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4202, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.7421, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.1692, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.514, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3259, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3354, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 4.1371, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:B:M3L:36:15", "ligand_label_asym_id": "B", "minimum_Pfam_distance_angstrom": 2.7421, "minimum_chain_distance_angstrom": 2.7421, "minimum_core_distance_angstrom": 2.7421, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "A", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.4232, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6615, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6588, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.7743, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.4691, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.615, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9211, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.5555, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.4232, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6615, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6588, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.7743, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.4691, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.615, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9211, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.5555, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:C:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.4232, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6615, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6588, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.7743, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.4691, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.615, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9211, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.5555, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale3\", \"PDB:2X4Y:CONN:covale4\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"D\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"C\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"D\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale3\", \"PDB:2X4Y:CONN:covale4\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "D", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:D:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3274, "nearest_polypeptide_label_asym_id": "D", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 4.4232, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6615, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.6588, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.7743, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.4691, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.615, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 2.9211, \"uniprot_position\": null}, {\"auth_asym_id\": \"C\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"C\", \"minimum_distance_angstrom\": 3.5555, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 3.5126, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 1.3274, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 1.3333, \"uniprot_position\": null}, {\"auth_asym_id\": \"D\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"D\", \"minimum_distance_angstrom\": 4.0022, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:D:M3L:36:15", "ligand_label_asym_id": "D", "minimum_Pfam_distance_angstrom": 2.9211, "minimum_chain_distance_angstrom": 2.9211, "minimum_core_distance_angstrom": 2.9211, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "C", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.448, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.705, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.9256, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6943, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6026, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7209, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4207, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.8563, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.5141, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.448, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.705, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.9256, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6943, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6026, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7209, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4207, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.8563, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.5141, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:E:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.448, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.705, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.9256, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6943, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6026, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7209, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4207, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.8563, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.5141, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale5\", \"PDB:2X4Y:CONN:covale6\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"F\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"E\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"F\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale5\", \"PDB:2X4Y:CONN:covale6\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "F", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:F:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3237, "nearest_polypeptide_label_asym_id": "F", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.448, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.705, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 4.9256, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6943, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.6026, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.7209, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.4207, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 2.8563, \"uniprot_position\": null}, {\"auth_asym_id\": \"E\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"E\", \"minimum_distance_angstrom\": 3.5141, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 3.4879, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 1.3237, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 1.3337, \"uniprot_position\": null}, {\"auth_asym_id\": \"F\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"F\", \"minimum_distance_angstrom\": 3.675, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:F:M3L:36:15", "ligand_label_asym_id": "F", "minimum_Pfam_distance_angstrom": 2.8563, "minimum_chain_distance_angstrom": 2.8563, "minimum_core_distance_angstrom": 2.8563, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "E", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.217, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.8509, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7377, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5958, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3527, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.4413, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.8674, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.1706, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.217, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.8509, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7377, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5958, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3527, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.4413, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.8674, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.1706, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:G:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.217, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.8509, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7377, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5958, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3527, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.4413, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.8674, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.1706, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale7\", \"PDB:2X4Y:CONN:covale8\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"H\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"G\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"H\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale7\", \"PDB:2X4Y:CONN:covale8\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "H", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:H:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3266, "nearest_polypeptide_label_asym_id": "H", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 4.217, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.8509, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.7377, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.5958, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.3527, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.4413, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 2.8674, \"uniprot_position\": null}, {\"auth_asym_id\": \"G\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"G\", \"minimum_distance_angstrom\": 3.1706, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 3.4456, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 1.3267, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 1.3266, \"uniprot_position\": null}, {\"auth_asym_id\": \"H\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"H\", \"minimum_distance_angstrom\": 3.7959, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:H:M3L:36:15", "ligand_label_asym_id": "H", "minimum_Pfam_distance_angstrom": 2.8674, "minimum_chain_distance_angstrom": 2.8674, "minimum_core_distance_angstrom": 2.8674, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "G", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.4738, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3622, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.7505, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6887, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6757, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3033, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 2.7424, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.1708, \"uniprot_position\": 1155}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.8455, \"uniprot_position\": 1184}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.4738, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3622, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.7505, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6887, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6757, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3033, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 2.7424, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.1708, \"uniprot_position\": 1155}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.8455, \"uniprot_position\": 1184}]", "chain_id": "PDB:2X4Y:CHAIN:I:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.4738, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3622, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.7505, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6887, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6757, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3033, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 2.7424, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.1708, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale9\", \"PDB:2X4Y:CONN:covale10\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"J\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"I\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"J\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale9\", \"PDB:2X4Y:CONN:covale10\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "J", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:J:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3261, "nearest_polypeptide_label_asym_id": "J", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.4738, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3622, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.7505, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6887, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.6757, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.3033, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 2.7424, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 3.1708, \"uniprot_position\": null}, {\"auth_asym_id\": \"I\", \"auth_seq_id\": \"1184\", \"component\": \"ILE\", \"entity_position\": 111, \"label_asym_id\": \"I\", \"minimum_distance_angstrom\": 4.8455, \"uniprot_position\": null}, {\"auth_asym_id\": \"J\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"J\", \"minimum_distance_angstrom\": 3.4005, \"uniprot_position\": null}, {\"auth_asym_id\": \"J\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"J\", \"minimum_distance_angstrom\": 1.3364, \"uniprot_position\": null}, {\"auth_asym_id\": \"J\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"J\", \"minimum_distance_angstrom\": 1.3261, \"uniprot_position\": null}, {\"auth_asym_id\": \"J\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"J\", \"minimum_distance_angstrom\": 4.2567, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:J:M3L:36:15", "ligand_label_asym_id": "J", "minimum_Pfam_distance_angstrom": 2.7424, "minimum_chain_distance_angstrom": 2.7424, "minimum_core_distance_angstrom": 2.7424, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "I", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:J:M3L:36:15:SITE:UP:P55201:PWWP1:I", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.0822, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.619, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.6183, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6126, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6449, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.3771, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.5822, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.8287, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.888, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.0822, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.619, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.6183, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6126, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6449, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.3771, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.5822, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.8287, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.888, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:K:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.0822, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.619, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.6183, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6126, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6449, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.3771, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.5822, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.8287, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.888, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale11\", \"PDB:2X4Y:CONN:covale12\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"L\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"K\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"L\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale11\", \"PDB:2X4Y:CONN:covale12\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "L", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:L:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3218, "nearest_polypeptide_label_asym_id": "L", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.0822, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.619, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 4.6183, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6126, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.6449, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.3771, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 3.5822, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.8287, \"uniprot_position\": null}, {\"auth_asym_id\": \"K\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"K\", \"minimum_distance_angstrom\": 2.888, \"uniprot_position\": null}, {\"auth_asym_id\": \"L\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"L\", \"minimum_distance_angstrom\": 3.4816, \"uniprot_position\": null}, {\"auth_asym_id\": \"L\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"L\", \"minimum_distance_angstrom\": 1.3218, \"uniprot_position\": null}, {\"auth_asym_id\": \"L\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"L\", \"minimum_distance_angstrom\": 1.3387, \"uniprot_position\": null}, {\"auth_asym_id\": \"L\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"L\", \"minimum_distance_angstrom\": 4.5521, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:L:M3L:36:15", "ligand_label_asym_id": "L", "minimum_Pfam_distance_angstrom": 2.8287, "minimum_chain_distance_angstrom": 2.8287, "minimum_core_distance_angstrom": 2.8287, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "K", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:L:M3L:36:15:SITE:UP:P55201:PWWP1:K", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 4.3152, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7014, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.743, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.5673, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.6665, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.4619, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 2.8368, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7898, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 4.3152, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7014, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.743, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.5673, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.6665, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.4619, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 2.8368, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7898, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:M:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 4.3152, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7014, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.743, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.5673, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.6665, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.4619, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 2.8368, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7898, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale13\", \"PDB:2X4Y:CONN:covale14\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"N\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"M\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"N\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale13\", \"PDB:2X4Y:CONN:covale14\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "N", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:N:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3246, "nearest_polypeptide_label_asym_id": "N", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 4.3152, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7014, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.743, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.5673, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.6665, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.4619, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 2.8368, \"uniprot_position\": null}, {\"auth_asym_id\": \"M\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"M\", \"minimum_distance_angstrom\": 3.7898, \"uniprot_position\": null}, {\"auth_asym_id\": \"N\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"N\", \"minimum_distance_angstrom\": 3.4972, \"uniprot_position\": null}, {\"auth_asym_id\": \"N\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"N\", \"minimum_distance_angstrom\": 1.34, \"uniprot_position\": null}, {\"auth_asym_id\": \"N\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"N\", \"minimum_distance_angstrom\": 1.3246, \"uniprot_position\": null}, {\"auth_asym_id\": \"N\", \"auth_seq_id\": \"38\", \"component\": \"PRO\", \"entity_position\": 17, \"label_asym_id\": \"N\", \"minimum_distance_angstrom\": 3.5852, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:N:M3L:36:15", "ligand_label_asym_id": "N", "minimum_Pfam_distance_angstrom": 2.8368, "minimum_chain_distance_angstrom": 2.8368, "minimum_core_distance_angstrom": 2.8368, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "M", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:N:M3L:36:15:SITE:UP:P55201:PWWP1:M", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.7498, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1094\", \"component\": \"ARG\", \"entity_position\": 21, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.0124, \"uniprot_position\": 1094}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.7047, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.9566, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6716, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6308, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6997, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.4173, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 2.7572, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.5647, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.7498, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1094\", \"component\": \"ARG\", \"entity_position\": 21, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.0124, \"uniprot_position\": 1094}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.7047, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.9566, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6716, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6308, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6997, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.4173, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 2.7572, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.5647, \"uniprot_position\": 1155}]", "chain_id": "PDB:2X4Y:CHAIN:O:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.7498, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1094\", \"component\": \"ARG\", \"entity_position\": 21, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.0124, \"uniprot_position\": 1094}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.7047, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.9566, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6716, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6308, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6997, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.4173, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 2.7572, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.5647, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale15\", \"PDB:2X4Y:CONN:covale16\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"P\"]", "auth_seq_id": "36", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"PEREGRIN\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"O\", \"sequence_length\": 132, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"HISTONE H3.2\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"P\", \"sequence_length\": 21, \"uniprot_ids\": [\"Q71DI3\"]}]", "covalent_connection_ids": "[\"PDB:2X4Y:CONN:covale15\", \"PDB:2X4Y:CONN:covale16\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "P", "label_seq_id": "15", "ligand_instance_id": "PDB:2X4Y:LIG:P:M3L:36:15", "nearest_polypeptide_distance_angstrom": 1.3328, "nearest_polypeptide_label_asym_id": "P", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "2X4Y", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 20, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.7498, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1094\", \"component\": \"ARG\", \"entity_position\": 21, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.0124, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 23, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.7047, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 24, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 4.9566, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 26, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6716, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 74, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6308, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 76, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.6997, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 80, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.4173, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 81, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 2.7572, \"uniprot_position\": null}, {\"auth_asym_id\": \"O\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 82, \"label_asym_id\": \"O\", \"minimum_distance_angstrom\": 3.5647, \"uniprot_position\": null}, {\"auth_asym_id\": \"P\", \"auth_seq_id\": \"34\", \"component\": \"GLY\", \"entity_position\": 13, \"label_asym_id\": \"P\", \"minimum_distance_angstrom\": 3.8038, \"uniprot_position\": null}, {\"auth_asym_id\": \"P\", \"auth_seq_id\": \"35\", \"component\": \"VAL\", \"entity_position\": 14, \"label_asym_id\": \"P\", \"minimum_distance_angstrom\": 1.3331, \"uniprot_position\": null}, {\"auth_asym_id\": \"P\", \"auth_seq_id\": \"37\", \"component\": \"LYS\", \"entity_position\": 16, \"label_asym_id\": \"P\", \"minimum_distance_angstrom\": 1.3328, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/2X4Y/original.cif", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:2X4Y:LIG:P:M3L:36:15", "ligand_label_asym_id": "P", "minimum_Pfam_distance_angstrom": 2.7572, "minimum_chain_distance_angstrom": 2.7572, "minimum_core_distance_angstrom": 2.7572, "multiple_contacting_mapped_chains": 0, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "protein_label_asym_id": "O", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:2X4Y:LIG:P:M3L:36:15:SITE:UP:P55201:PWWP1:O", "source_coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7" }, { "Pfam_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 16, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.599, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 19, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7092, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.8654, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 22, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.766, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 70, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 72, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4763, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5524, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 77, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8003, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 78, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8714, \"uniprot_position\": 1155}]", "biochemical_activity_inferred": 0, "ccd_id": "M3L", "chain_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 16, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.599, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 19, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7092, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.8654, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 22, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.766, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 70, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 72, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4763, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5524, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 77, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8003, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 78, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8714, \"uniprot_position\": 1155}]", "chain_id": "PDB:3MO8:CHAIN:A:UP:P55201", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "contact_distance_rank": 1, "core_contacts_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 16, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.599, \"uniprot_position\": 1093}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 19, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7092, \"uniprot_position\": 1096}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.8654, \"uniprot_position\": 1097}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 22, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.766, \"uniprot_position\": 1099}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 70, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": 1147}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 72, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4763, \"uniprot_position\": 1149}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5524, \"uniprot_position\": 1153}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 77, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8003, \"uniprot_position\": 1154}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 78, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8714, \"uniprot_position\": 1155}]", "covalent_connection_ids": "[\"PDB:3MO8:CONN:covale1\", \"PDB:3MO8:CONN:covale2\"]", "cutoff_angstrom": 5.0, "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "gene": "BRPF1", "geometry_scope": "first deposited model; asymmetric unit; heavy atoms with occupancy >0; alternate locations retained; no symmetry expansion", "instance": { "alternate_locations": "[]", "auth_asym_ids": "[\"B\"]", "auth_seq_id": "7", "ccd_id": "M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "component_context": "polymer_modified_monomer", "contacted_polymer_partners": "[{\"description\": \"Peregrin\", \"entity_id\": \"1\", \"is_PWWP_family_protein\": true, \"label_asym_id\": \"A\", \"sequence_length\": 130, \"uniprot_ids\": [\"P55201\"]}, {\"description\": \"Histone H3.2 TRIMETHYLATED H3K36 PEPTIDE\", \"entity_id\": \"2\", \"is_PWWP_family_protein\": false, \"label_asym_id\": \"B\", \"sequence_length\": 12, \"uniprot_ids\": [\"Q16695\"]}]", "covalent_connection_ids": "[\"PDB:3MO8:CONN:covale1\", \"PDB:3MO8:CONN:covale2\"]", "heavy_atom_row_count": 12, "ideal_CCD_SDF_is_source_pose": 0, "label_asym_id": "B", "label_seq_id": "7", "ligand_instance_id": "PDB:3MO8:LIG:B:M3L:7:7", "nearest_polypeptide_distance_angstrom": 1.3317, "nearest_polypeptide_label_asym_id": "B", "occupancy_max": 1.0, "occupancy_min": 1.0, "pdb_id": "3MO8", "polypeptide_contact_residues_5A": "[{\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1093\", \"component\": \"CYS\", \"entity_position\": 16, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.599, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1096\", \"component\": \"TYR\", \"entity_position\": 19, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.7092, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1097\", \"component\": \"PRO\", \"entity_position\": 20, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 4.8654, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1099\", \"component\": \"TYR\", \"entity_position\": 22, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.766, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1147\", \"component\": \"PHE\", \"entity_position\": 70, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.6595, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1149\", \"component\": \"ASP\", \"entity_position\": 72, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.4763, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1153\", \"component\": \"THR\", \"entity_position\": 76, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 3.5524, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1154\", \"component\": \"TRP\", \"entity_position\": 77, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8003, \"uniprot_position\": null}, {\"auth_asym_id\": \"A\", \"auth_seq_id\": \"1155\", \"component\": \"GLN\", \"entity_position\": 78, \"label_asym_id\": \"A\", \"minimum_distance_angstrom\": 2.8714, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"5\", \"component\": \"GLY\", \"entity_position\": 5, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.4747, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"6\", \"component\": \"VAL\", \"entity_position\": 6, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3407, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"8\", \"component\": \"LYS\", \"entity_position\": 8, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 1.3317, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"9\", \"component\": \"PRO\", \"entity_position\": 9, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 4.4826, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"11\", \"component\": \"ARG\", \"entity_position\": 11, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 4.9638, \"uniprot_position\": null}, {\"auth_asym_id\": \"B\", \"auth_seq_id\": \"12\", \"component\": \"TYR\", \"entity_position\": 12, \"label_asym_id\": \"B\", \"minimum_distance_angstrom\": 3.6648, \"uniprot_position\": null}]", "pose_kind": "deposited_source_coordinates", "reference_model": "1", "source_coordinate_file": "Structures/BRPF1__HUMAN__P55201/Complexes/3MO8/original.cif", "source_coordinate_sha256": "0c113749d3cb37678cc51da222d840d091b0e971f92cfb843aa3165a8a99bba5", "unique_heavy_atom_names": 12 }, "ligand_instance_id": "PDB:3MO8:LIG:B:M3L:7:7", "ligand_label_asym_id": "B", "minimum_Pfam_distance_angstrom": 2.8003, "minimum_chain_distance_angstrom": 2.8003, "minimum_core_distance_angstrom": 2.8003, "multiple_contacting_mapped_chains": 0, "pdb_id": "3MO8", "protein_id": "UP:P55201", "protein_label_asym_id": "A", "rank_interpretation": "Distance rank among mapped chains only; crystal packing and biological site assignment require separate review.", "role": null, "role_category": null, "site_id": "PDB:3MO8:LIG:B:M3L:7:7:SITE:UP:P55201:PWWP1:A", "source_coordinate_sha256": "0c113749d3cb37678cc51da222d840d091b0e971f92cfb843aa3165a8a99bba5" } ], "context_assay_count": 0, "context_measured_count": 0, "context_bound_count": 4, "context_pdb_count": 4, "context_negative_count": 0, "context_is_probe": false, "context_bioactivity_only": false, "context_kind": "PWWP-proximal structure", "science": { "studied_compound": false, "measured_count": 0, "structural_research_ligand": false, "research_pdb_count": 0, "other_component": false, "component_site_count": 0, "verification_queue": true, "positive_direct_binder": false, "reported_probe": false, "reported_control": false, "cellular_activity": false, "protein_degradation": false, "bioactivity_only": false, "research_site_count": 0, "unknown_site_count": 14, "annotation_roles": [ "unresolved" ] }, "science_label": "Identity / evidence review pending", "science_profile": { "annotation_roles": [ "unresolved" ], "cellular_activity": false, "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "entity_kind": "chemical_identity", "identity_resolved": true, "measured_observation_count": 0, "name": "N-TRIMETHYLLYSINE", "other_pdb_component": false, "other_site_count": 0, "positive_direct_binder": false, "primary_view": "unresolved", "protein_degradation": false, "reported_control": false, "reported_probe": false, "rule": "Independent source observations + per-site coordinate role, not universal pharmacology", "source_observation_ids": [], "source_site_ids": [ "PDB:3MO8:LIG:B:M3L:7:7:SITE:UP:P55201:PWWP1:A", "PDB:2X4Y:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "PDB:2X4W:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "PDB:2X4X:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "PDB:3QJ6:LIG:B:M3L:79:7:SITE:UP:Q7Z4V5:PWWP1:A", "PDB:6IIS:LIG:E:M3L:36:4:SITE:UP:Q9Y3E1:PWWP1:A", "PDB:5CIU:LIG:D:M3L:36:9:SITE:UP:Q9UBC3:PWWP1:A", "PDB:4N4I:LIG:B:M3L:36:18:SITE:UP:Q8R5C8:PWWP1:A", "PDB:4N4H:LIG:B:M3L:36:16:SITE:UP:Q8R5C8:PWWP1:A", "PDB:3QBY:LIG:D:M3L:20:6:SITE:UP:Q7Z4V5:PWWP1:A", "PDB:3QBY:LIG:D:M3L:20:6:SITE:UP:Q7Z4V5:PWWP1:B", "PDB:6IIS:LIG:F:M3L:36:4:SITE:UP:Q9Y3E1:PWWP1:B", "PDB:5CIU:LIG:C:M3L:36:9:SITE:UP:Q9UBC3:PWWP1:B", "PDB:2X4Y:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "PDB:2X4X:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "PDB:2X4X:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "PDB:2X4Y:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "PDB:2X4Y:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "PDB:2X4X:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "PDB:2X4Y:LIG:J:M3L:36:15:SITE:UP:P55201:PWWP1:I", "PDB:2X4Y:LIG:L:M3L:36:15:SITE:UP:P55201:PWWP1:K", "PDB:2X4Y:LIG:N:M3L:36:15:SITE:UP:P55201:PWWP1:M", "PDB:2X4Y:LIG:P:M3L:36:15:SITE:UP:P55201:PWWP1:O" ], "structural_research_ligand": false, "structural_research_site_count": 0, "studied_compound": false, "total_observation_count": 0, "uncertain_site_count": 23, "uncertainty": "Classification is evidence- and experiment-scoped; missing assays do not prove nonbinding.", "verification_queue": true, "verification_status": "source_scoped_mixed" }, "science_site_roles": { "PDB:2X4W:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "abae03e17ec0f4543683c8be73cb4157fc69c0b3ab21a2d1f83fabbe6fec1783", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4W:LIG:B:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4W", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4W:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4W", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4X:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4X:LIG:B:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4X", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4X:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4X", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4X:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4X:LIG:D:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4X", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4X:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4X", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4X:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4X:LIG:F:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4X", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4X:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4X", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4X:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "f013aab80fdce256f5d371e91a4d19e4d9917989b33e83195440290a400e7097", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4X:LIG:H:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4X", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4X:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4X", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:B:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:B:M3L:36:15:SITE:UP:P55201:PWWP1:A", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:D:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:D:M3L:36:15:SITE:UP:P55201:PWWP1:C", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:F:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:F:M3L:36:15:SITE:UP:P55201:PWWP1:E", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:H:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:H:M3L:36:15:SITE:UP:P55201:PWWP1:G", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:J:M3L:36:15:SITE:UP:P55201:PWWP1:I": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:J:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:J:M3L:36:15:SITE:UP:P55201:PWWP1:I", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:L:M3L:36:15:SITE:UP:P55201:PWWP1:K": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:L:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:L:M3L:36:15:SITE:UP:P55201:PWWP1:K", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:N:M3L:36:15:SITE:UP:P55201:PWWP1:M": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:N:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:N:M3L:36:15:SITE:UP:P55201:PWWP1:M", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:2X4Y:LIG:P:M3L:36:15:SITE:UP:P55201:PWWP1:O": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "d176722770f62d8382f5a0ecad813969c335bbf99bff85449860bfe2d67c59b7", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:2X4Y:LIG:P:M3L:36:15", "observed_other_component": false, "pdb_id": "2X4Y", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:2X4Y:LIG:P:M3L:36:15:SITE:UP:P55201:PWWP1:O", "source_role": null, "source_url": "https://www.rcsb.org/structure/2X4Y", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" }, "PDB:3MO8:LIG:B:M3L:7:7:SITE:UP:P55201:PWWP1:A": { "ccd_url": "https://www.rcsb.org/ligand/M3L", "chemical_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "compound_id": "INCHIKEY:MXNRLFUSFKVQSK-QMMMGPOBSA-O", "contact_class": "native_annotation_core_contact", "coordinate_sha256": "0c113749d3cb37678cc51da222d840d091b0e971f92cfb843aa3165a8a99bba5", "domain_id": "UP:P55201:PWWP1", "exact_pwwp_contact": true, "ligand_instance_id": "PDB:3MO8:LIG:B:M3L:7:7", "observed_other_component": false, "pdb_id": "3MO8", "protein_id": "UP:P55201", "role_code": "unclassified_biological_component", "role_group": "context_unresolved", "rule": "Phase5 exact deposited site role, measured heavy-atom contacts and native-domain scope", "site_id": "PDB:3MO8:LIG:B:M3L:7:7:SITE:UP:P55201:PWWP1:A", "source_role": null, "source_url": "https://www.rcsb.org/structure/3MO8", "structural_research_ligand": false, "uncertainty": "Role is source-annotated; deposited proximity alone does not establish solution binding or biological activity.", "verification_status": "phase5_derived_deposited_geometry" } }, "science_assay_roles": {}, "example": null, "matched_observations": [], "matched_assay_count": 0 } ] }